; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1228 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1228
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationMC08:10586823..10589583
RNA-Seq ExpressionMC08g1228
SyntenyMC08g1228
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154133.1 54S ribosomal protein L37, mitochondrial-like [Momordica charantia]2.44e-82100Show/hide
Query:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
        MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
Subjt:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VEALPYEDLKRFVKLDNRASIKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]8.91e-6583.46Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAA-DGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR
        MAMSQ RL R S++N KD IK+T+VRTFAAGGKKKGSKGG AA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSEL+R
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAA-DGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        K+ + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]2.69e-6885.61Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK
        MAMSQ RLFR S++N KD IK+T+VRTFAAGGKKKGSKGGAA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSELRRK
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        + + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]4.04e-6583.46Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR
        M MSQ RLFR SI+N+KD I++TSVRTFAAGGK KKGSKGGAAAD PKAS LSKEVKS+TVVGANILKEGADPK+MADSEYP WLW L+DKHP LSELRR
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        KNVE LPY DLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]3.11e-6583.46Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR
        M MSQ RLFR SI+N+KD I++TSVRTFAAGGK KKGSKGGAAAD PKAS LSKEVKS+TVVGANILKEGADPK+MADSEYP WLW L+DKHP LSELRR
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        KNVE LPY DLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

TrEMBL top hitse value%identityAlignment
A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like1.18e-82100Show/hide
Query:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
        MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
Subjt:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VEALPYEDLKRFVKLDNRASIKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like4.31e-6583.46Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAA-DGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR
        MAMSQ RL R S++N KD IK+T+VRTFAAGGKKKGSKGG AA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSEL+R
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAA-DGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        K+ + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like1.30e-6885.61Show/hide
Query:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK
        MAMSQ RLFR S++N KD IK+T+VRTFAAGGKKKGSKGGAA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSELRRK
Subjt:  MAMSQSRLFR-SIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        + + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A7J6EZF4 Uncharacterized protein3.87e-6380.92Show/hide
Query:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
        MAM+ +RLFRS I   D +     RTFAAG KKKG+KGGAA D PKASILSKEVKSSTVVGANILKEGADPKV+ADSEYPDWL+ LIDK PALSELRR+N
Subjt:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VE LPYEDLKRFVKLDNRA IKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A803R7Z3 Uncharacterized protein3.87e-6380.92Show/hide
Query:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN
        MAM+ +RLFRS I   D +     RTFAAG KKKG+KGGAA D PKASILSKEVKSSTVVGANILKEGADPKV+ADSEYPDWL+ LIDK PALSELRR+N
Subjt:  MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VE LPYEDLKRFVKLDNRA IKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial9.5e-0440.91Show/hide
Query:  SVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSST--VVGANILKEGADPKVMADSEYPDWLWRL
        S+R +A     KG KGG AA+  K   +  +    T   +G NI KEG D  + ADSEYP WL+++
Subjt:  SVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSST--VVGANILKEGADPKVMADSEYPDWLWRL

Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L372.9e-4068.33Show/hide
Query:  NAKDAIKVTSVRTFAAGGK--KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKR
        ++KD ++    RTFAA     KKG KGG A+D PK S L+KE+KS+TVVGAN LK+G+DPK++ DS+YPDWLW L+DK PALSELRRKNVE LPY+DLKR
Subjt:  NAKDAIKVTSVRTFAAGGK--KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKR

Query:  FVKLDNRASIKENNSIKAKN
        FVKLD R  IKENNSIKAKN
Subjt:  FVKLDNRASIKENNSIKAKN

AT5G14290.1 Mitochondrial ribosomal protein L371.1e-3460.61Show/hide
Query:  MSQSRLF-RSIINAKDAIKVTSVRTF--AAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK
        M+  R+F  SI  +KD ++    RTF  AAG  KK  +G    D PKAS LSKE+KSS VV AN LK+G DPK++ +S++PD+LW L+DK PALSELRRK
Subjt:  MSQSRLF-RSIINAKDAIKVTSVRTF--AAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        NVE L ++DLKRFVKLD RA IKEN+SIKAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAGCCAATCTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAA
AGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTTAAGGAAGGTGCAGATCCAAAAGTTA
TGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAA
CGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ACAGGGACTAAATTGAAACTTTGATAATTATGCGGACCAAATTGAAACTAAATCGACACTCAAGTGGGACTAAATTGAAAAGATTATTATAGCCCATATAAGAGAGCCTC
TAAGGCCGAAAGCCCAATTAGAGCTCCATTGTCACTGGTCCTCCTTCATCCTCAGATTCAGCCCTAAACCATCTGCCGTTCCTCTCCTTTCTGCCATTTTTGAACTCACA
AAGCTCGAATTCTCTGAATCAAGCTCCATCAACACTACTGCTTTCTTCCCCGTCATCTCTAGAAGAAAATATGGCTATGAGCCAATCTAGATTATTTAGAAGCATTATCA
ATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAAAGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTA
AGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTTAAGGAAGGTGCAGATCCAAAAGTTATGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGAT
CGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAACGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAA
ACAACTCTATTAAGGCCAAGAATTGATGTAAGAATCTAGCATAGGCTTTTGTTAATGTAATGCAGCTCCTTTCTTCCCACAATTATATATGATTAACTTTGGTCCTTTTT
TTTTTGTTTTACACCTACCCTCACCCCCGCAACGACCTTCGACCGTTCGACTTAGTCTTTGAGTGCTGGATTAGTGATATCATGTCATGGAAACACGATAAGGTCGTAGT
CTTGTACTGTAGAATGATTATCAATAACTAGCAAGCCTCATCTCTGATCTCTGCCTTGCCTATCACATTTTCACCTTTTTTGCATTATTTCTCTCTTGAAAGTCTATTCT
GATGCCTACTTTCTGTTAGTTTCTGCAAGAATGGTCAAAACCCGAGCAGCACGGCGCCAAGTGGATAGAATCTATAAACACAAACCAATCTTGTTGTGACCCTTTACTTC
TGCAGAAAAAAGAGAGTTAGGAGTCGAGTCAATCTCCTGAAAGCATCATGTGGAAGGAAGAACAAGCAAAACTGCAACAGCTTAACAGACACAAGTATTGCAGTGGGCCA
CCATCAAAGTTTCATCTGCTTCGTCCCACTCAAGCATAGTTTACCATCTTTCGGGTCCCAACAGCCATAAAGCCATAATTCTTTAATTGAATGAGAACATAAACTTGGAT
GATTCTTTTCATCATCGAAACCTTGAATTGTCAAAATTTTGAATGCGTACGGAATACTTTTATGTCCCACTAGATAATTTTATATCTCACCTTTTTTTTTTTAATAAATA
TAAAAATGAGCATCATATAGTTAACATTGTTAGGTGTGGTTGATGCTTCAAGTGGTTGTATTTGTGTCCACATGGTTGATAATGATAAGTCAACTTTCTTGTCC
Protein sequenceShow/hide protein sequence
MAMSQSRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLK
RFVKLDNRASIKENNSIKAKN