; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1374 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1374
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationMC08:13361413..13361850
RNA-Seq ExpressionMC08g1374
SyntenyMC08g1374
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149984.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]2.28e-2683.33Show/hide
Query:  MYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGS
        MY V TPARGPR RGRRQVDQDAP+ LDDPVPEVIYH VEDI  FTQT DDAG STPM MIPTPGS
Subjt:  MYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGS

XP_022152034.1 disease resistance protein RGA2-like [Momordica charantia]1.88e-2651.24Show/hide
Query:  SNKINTLCNVGGRHLQSLHQMYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQYHTPSRGSH---
        S +++TL    GRHLQ LHQMY+VP P     RRGRRQ++QDAP   + P PE IYH V+ +  F +T +D GP TPM+MIPTP SS  HTP +  +   
Subjt:  SNKINTLCNVGGRHLQSLHQMYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQYHTPSRGSH---

Query:  GRGHEEHGQYFNPTEDRDPTE
        G G  E+GQY NP ED+  +E
Subjt:  GRGHEEHGQYFNPTEDRDPTE

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.97e-0431.25Show/hide
Query:  ILSSSNKINTLCNVGGRHLQSLHQMYK---VPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQY
        +     ++  +CN   R+++ +H MY    VP P      RGR +V++     LD+     +YH VE++   TQT    G  +PM M+PT G+  Y
Subjt:  ILSSSNKINTLCNVGGRHLQSLHQMYK---VPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQY

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.82e-0431.25Show/hide
Query:  ILSSSNKINTLCNVGGRHLQSLHQMYK---VPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQY
        +     ++  +CN   R+++ +H MY    VP P      RGR +V++     LD+     +YH VE++   TQT    G  +PM M+PT G+  Y
Subjt:  ILSSSNKINTLCNVGGRHLQSLHQMYK---VPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQY

A0A6J1D8N6 serine/threonine-protein phosphatase 7 long form homolog1.11e-2683.33Show/hide
Query:  MYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGS
        MY V TPARGPR RGRRQVDQDAP+ LDDPVPEVIYH VEDI  FTQT DDAG STPM MIPTPGS
Subjt:  MYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGS

A0A6J1DEU3 disease resistance protein RGA2-like9.12e-2751.24Show/hide
Query:  SNKINTLCNVGGRHLQSLHQMYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQYHTPSRGSH---
        S +++TL    GRHLQ LHQMY+VP P     RRGRRQ++QDAP   + P PE IYH V+ +  F +T +D GP TPM+MIPTP SS  HTP +  +   
Subjt:  SNKINTLCNVGGRHLQSLHQMYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQYHTPSRGSH---

Query:  GRGHEEHGQYFNPTEDRDPTE
        G G  E+GQY NP ED+  +E
Subjt:  GRGHEEHGQYFNPTEDRDPTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCTCTCGTCATCAAACAAAATTAATACGTTGTGCAACGTTGGCGGGAGACATCTTCAGAGCCTTCATCAAATGTACAAAGTACCTACTCCTGCTCGTGGCCCT
AGGCGTAGAGGACGACGTCAAGTAGACCAAGATGCTCCAGTAGGGCTTGACGATCCCGTACCTGAAGTTATCTATCATAGAGTTGAAGACATTCTACTGTTTACA
CAGACACATGATGATGCTGGTCCGTCCACGCCTATGATCATGATACCGACTCCTGGTTCTAGTCAGTATCACACACCATCTAGAGGGAGCCATGGACGTGGACAT
GAAGAGCATGGACAATACTTCAACCCTACAGAGGATCGAGACCCTACAGAGGGTCAGGAGACACCAACGGCACCAATAGTTCGTCACCAGCCACATCGTAACCGA
CGACATCCCCATTGTGGG
mRNA sequenceShow/hide mRNA sequence
ATTCTCTCGTCATCAAACAAAATTAATACGTTGTGCAACGTTGGCGGGAGACATCTTCAGAGCCTTCATCAAATGTACAAAGTACCTACTCCTGCTCGTGGCCCT
AGGCGTAGAGGACGACGTCAAGTAGACCAAGATGCTCCAGTAGGGCTTGACGATCCCGTACCTGAAGTTATCTATCATAGAGTTGAAGACATTCTACTGTTTACA
CAGACACATGATGATGCTGGTCCGTCCACGCCTATGATCATGATACCGACTCCTGGTTCTAGTCAGTATCACACACCATCTAGAGGGAGCCATGGACGTGGACAT
GAAGAGCATGGACAATACTTCAACCCTACAGAGGATCGAGACCCTACAGAGGGTCAGGAGACACCAACGGCACCAATAGTTCGTCACCAGCCACATCGTAACCGA
CGACATCCCCATTGTGGG
Protein sequenceShow/hide protein sequence
ILSSSNKINTLCNVGGRHLQSLHQMYKVPTPARGPRRRGRRQVDQDAPVGLDDPVPEVIYHRVEDILLFTQTHDDAGPSTPMIMIPTPGSSQYHTPSRGSHGRGH
EEHGQYFNPTEDRDPTEGQETPTAPIVRHQPHRNRRHPHCG