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MC08g1400 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1400
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionHistone H2A
Genome locationMC08:14917395..14917502
RNA-Seq ExpressionMC08g1400
SyntenyMC08g1400
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1877568.1 unnamed protein product [Brassica napus]5.79e-0975Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
KAG1337907.1 histone H2A [Cocos nucifera]3.39e-0875Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        ME G KVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
KAG2310327.1 hypothetical protein Bca52824_021884 [Brassica carinata]1.87e-0875Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
VDD18100.1 unnamed protein product [Brassica oleracea]1.07e-0875Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
XP_009125454.1 probable histone H2A.4 [Brassica rapa]1.87e-0875Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
TrEMBL top hitse value%identityAlignment
A0A398AC63 Histone H2A9.03e-0975Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
A0A3P6CU84 Histone H2A5.20e-0975Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
A0A6P6ARG9 Histone H2A2.56e-0872.22Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GR+GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
A0A7J8WRZ2 Histone H2A (Fragment)1.80e-0869.44Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ G+KVKKG  GR+GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
M4EJA3 Histone H2A9.03e-0975Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRRGGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
SwissProt top hitse value%identityAlignment
P25470 Histone H2A.16.2e-0661.11Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+  TK KKG  GR+GGGP+KKSV+RS++  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
P40281 Histone H2A.24.8e-0661.11Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+  TKVKKG  GR+GGGP+KK+V+RS++  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
Q2HU65 Probable histone H2A.26.2e-0661.11Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+  TK KKG  GR+GGGP+KKSV+RS++  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
Q9LZ46 Probable histone H2A.43.7e-0672.97Show/hide
Query:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRR GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV
Q9M531 Histone H2A1.1e-0563.89Show/hide
Query:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
        M+ G K+KKG   R+GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV
Arabidopsis top hitse value%identityAlignment
AT5G02560.1 histone H2A 122.6e-0772.97Show/hide
Query:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRR GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV
AT5G02560.2 histone H2A 122.6e-0772.97Show/hide
Query:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV
        M+ GTKVKKG  GRR GGGPKKK VSRS+K  L FPV
Subjt:  MEFGTKVKKGVDGRR-GGGPKKKSVSRSMKVSLHFPV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGGCACCAAGGTGAAAAAAGGTGTAGACGGTAGAAGGGGTGGCGGTCCTAAGAAAAAGTCGGTGTCTCGCTCTATGAAAGTCAGCCTGCACTTTCCGGTC
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGGCACCAAGGTGAAAAAAGGTGTAGACGGTAGAAGGGGTGGCGGTCCTAAGAAAAAGTCGGTGTCTCGCTCTATGAAAGTCAGCCTGCACTTTCCGGTC
Protein sequenceShow/hide protein sequence
MEFGTKVKKGVDGRRGGGPKKKSVSRSMKVSLHFPV