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MC08g1410 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1410
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC08:15537466..15537630
RNA-Seq ExpressionMC08g1410
SyntenyMC08g1410
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573816.1 hypothetical protein SDJN03_27703, partial [Cucurbita argyrosperma subsp. sororia]1.73e-0962.22Show/hide
Query:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        FF     +DYF MV QW PATC    VACYT P  MFTI GLWPS
Subjt:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
XP_022157616.1 ribonuclease MC-like [Momordica charantia]1.58e-1571.43Show/hide
Query:  FLLLIFIFMFFFMGGEGYDYFLMVQQWGPATCTGVGVACY-TFPLLMFTIDGLWPS
        FLLL+F+FMFF MG +GYDYFLMVQQWGP  CTGV V C+ T PL  FTI GLWP 
Subjt:  FLLLIFIFMFFFMGGEGYDYFLMVQQWGPATCTGVGVACY-TFPLLMFTIDGLWPS
XP_022158516.1 ribonuclease MC-like [Momordica charantia]4.70e-1171.43Show/hide
Query:  GGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        G EGYDYFLMVQQWGP+TC  V   CY  PL MFTI GLWP 
Subjt:  GGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
XP_023541880.1 ribonuclease S-6-like isoform X2 [Cucurbita pepo subsp. pepo]9.43e-0960Show/hide
Query:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        FF     +DYF MV QW PATC    V CYT P  MFTI GLWPS
Subjt:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
XP_038906187.1 ribonuclease MC-like [Benincasa hispida]1.70e-1073.68Show/hide
Query:  YDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        YDYF MVQQW PATC+GVGV C   P  MFTI GLWPS
Subjt:  YDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
TrEMBL top hitse value%identityAlignment
A0A6J1DYQ5 Ribonuclease T(2)7.64e-1671.43Show/hide
Query:  FLLLIFIFMFFFMGGEGYDYFLMVQQWGPATCTGVGVACY-TFPLLMFTIDGLWPS
        FLLL+F+FMFF MG +GYDYFLMVQQWGP  CTGV V C+ T PL  FTI GLWP 
Subjt:  FLLLIFIFMFFFMGGEGYDYFLMVQQWGPATCTGVGVACY-TFPLLMFTIDGLWPS
A0A6J1E145 Ribonuclease T(2)2.27e-1171.43Show/hide
Query:  GGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        G EGYDYFLMVQQWGP+TC  V   CY  PL MFTI GLWP 
Subjt:  GGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
A0A6J1EXD5 Ribonuclease T(2)2.00e-0868.42Show/hide
Query:  YDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        +DYF MVQQW PATC+GV   CY  P  MFTI GLWPS
Subjt:  YDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
A0A6J1FZP3 Ribonuclease T(2)6.18e-0960Show/hide
Query:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        FF     +DYF MV QW PATC    V CYT P  MFTI GLWPS
Subjt:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
A0A6J1FZQ4 Ribonuclease T(2)8.33e-0960Show/hide
Query:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
        FF     +DYF MV QW PATC    V CYT P  MFTI GLWPS
Subjt:  FFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCTTCTCCTCATATTCATATTCATGTTCTTCTTCATGGGAGGTGAAGGATATGATTACTTTCTGATGGTCCAACAATGGGGGCCAGCCACATGTACCGGCGTCGGGGT
GGCATGTTACACGTTTCCTCTGCTCATGTTCACAATTGATGGTCTTTGGCCCAGC
mRNA sequenceShow/hide mRNA sequence
TTTCTTCTCCTCATATTCATATTCATGTTCTTCTTCATGGGAGGTGAAGGATATGATTACTTTCTGATGGTCCAACAATGGGGGCCAGCCACATGTACCGGCGTCGGGGT
GGCATGTTACACGTTTCCTCTGCTCATGTTCACAATTGATGGTCTTTGGCCCAGC
Protein sequenceShow/hide protein sequence
FLLLIFIFMFFFMGGEGYDYFLMVQQWGPATCTGVGVACYTFPLLMFTIDGLWPS