; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1419 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1419
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribonuclease MC-like
Genome locationMC08:16123711..16124103
RNA-Seq ExpressionMC08g1419
SyntenyMC08g1419
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR033130 - Ribonuclease T2, His active site 2
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149793.1 ribonuclease MC-like [Momordica charantia]2.04e-3249.62Show/hide
Query:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCS-SAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNY
        QI  +Q  + + WPN+ T  N   W +EW KHGTCS S +  Q  YF FG+  Y +++LQ  L    I PNG+ YT+  V  AI + TGK PA+RCN N 
Subjt:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCS-SAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNY

Query:  RTGNMQLHEISLCFSKNGQVLIDCPFNAVAC
        RTG  QLHEISLCF K+  V  DCP NA  C
Subjt:  RTGNMQLHEISLCFSKNGQVLIDCPFNAVAC

XP_022156540.1 ribonuclease MC-like [Momordica charantia]2.22e-5361.72Show/hide
Query:  TIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGN
        +I+ARL QDWP+++ + +P FW +EWT HGTCS AYL QFHYF+FGL+VY N D+   L  Y +YPNG  Y ++ V+N IYSATGKWPALRCNNN+ +G+
Subjt:  TIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGN

Query:  MQLHEISLCFSKNGQVLIDCPFNAVACN
        +QLHEISLCF K    L DCP+NAV CN
Subjt:  MQLHEISLCFSKNGQVLIDCPFNAVACN

XP_022158939.1 ribonuclease MC-like [Momordica charantia]1.35e-8792.31Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        ILTIQARLDQDWPN+IT QNP FW YEWTKHGTCSSAYL+QFHYFNFGLWVYTN DLQS LYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQLHEISLCFSKNGQVLIDCPFNAVACN
        GNMQLHEISLCFSKNGQ+LIDCPFN V CN
Subjt:  GNMQLHEISLCFSKNGQVLIDCPFNAVACN

XP_022159354.1 ribonuclease MC-like [Momordica charantia]1.76e-3549.61Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        I TI+ RL+ DWP++I   NP+ W +EWT HGTCS   LSQ  YF FGL  Y   D+ S L +  IYP+   Y+K+ + NAI   T K P LRCN N  +
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC
           QLHEI LCF+K+ + +IDCP N V C
Subjt:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC

XP_038903348.1 ribonuclease MC-like [Benincasa hispida]5.54e-4452.71Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        I  I++RLDQDWP+++   NP+ W +EW  HGTCS+ YL Q++YFNFGL V+   ++ S L +YGI P+G  Y+   +++AIY+AT KWPALRCN N  +
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC
        G  QL+EI+LCF+K  + L DCP+NAV C
Subjt:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC

TrEMBL top hitse value%identityAlignment
A0A6J1D7Q5 ribonuclease MC-like9.88e-3349.62Show/hide
Query:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCS-SAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNY
        QI  +Q  + + WPN+ T  N   W +EW KHGTCS S +  Q  YF FG+  Y +++LQ  L    I PNG+ YT+  V  AI + TGK PA+RCN N 
Subjt:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCS-SAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNY

Query:  RTGNMQLHEISLCFSKNGQVLIDCPFNAVAC
        RTG  QLHEISLCF K+  V  DCP NA  C
Subjt:  RTGNMQLHEISLCFSKNGQVLIDCPFNAVAC

A0A6J1DQK2 ribonuclease MC-like1.07e-5361.72Show/hide
Query:  TIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGN
        +I+ARL QDWP+++ + +P FW +EWT HGTCS AYL QFHYF+FGL+VY N D+   L  Y +YPNG  Y ++ V+N IYSATGKWPALRCNNN+ +G+
Subjt:  TIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGN

Query:  MQLHEISLCFSKNGQVLIDCPFNAVACN
        +QLHEISLCF K    L DCP+NAV CN
Subjt:  MQLHEISLCFSKNGQVLIDCPFNAVACN

A0A6J1DYI5 ribonuclease MC-like2.97e-2845.52Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNS--DLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCN---
        I++I+A L+Q+WP++I ++N  FW  EW KHGTCS   L+Q  YF FGL +Y +   D+   L +  I PNG++Y K  V+ AI S  GK    RCN   
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNS--DLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCN---

Query:  NNYRTGNMQLHEISLCFSKNGQVLIDCPFNAVAC
        +NY     QLHEIS C++K+   L DCP NA  C
Subjt:  NNYRTGNMQLHEISLCFSKNGQVLIDCPFNAVAC

A0A6J1E0X1 ribonuclease MC-like6.55e-8892.31Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        ILTIQARLDQDWPN+IT QNP FW YEWTKHGTCSSAYL+QFHYFNFGLWVYTN DLQS LYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQLHEISLCFSKNGQVLIDCPFNAVACN
        GNMQLHEISLCFSKNGQ+LIDCPFN V CN
Subjt:  GNMQLHEISLCFSKNGQVLIDCPFNAVACN

A0A6J1E266 ribonuclease MC-like8.51e-3649.61Show/hide
Query:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        I TI+ RL+ DWP++I   NP+ W +EWT HGTCS   LSQ  YF FGL  Y   D+ S L +  IYP+   Y+K+ + NAI   T K P LRCN N  +
Subjt:  ILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC
           QLHEI LCF+K+ + +IDCP N V C
Subjt:  GNMQLHEISLCFSKNGQVLIDCPFNAVAC

SwissProt top hitse value%identityAlignment
B8XY56 Ribonuclease T22.7e-1435.83Show/hide
Query:  IQARLDQDWPNMITQQNPSFWCYEWTKHGTC---SSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT
        I   +++ WP+++   +P FW YEWTKHGTC   S +  S+  YF   L +Y   DL S L +  I P+ + YT   V+ AI SA G  P ++C +  + 
Subjt:  IQARLDQDWPNMITQQNPSFWCYEWTKHGTC---SSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRT

Query:  GNMQ-LHEISLCFSKNGQVL
        G +Q L +I +C  ++ Q++
Subjt:  GNMQ-LHEISLCFSKNGQVL

P23540 Ribonuclease MC3.6e-1932.82Show/hide
Query:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYR
        +I  +Q++L+  WPN++   N  FW +EWTKHGTCS +  +Q  YF   + +  N D+   L  +   PNG+  ++  ++  + +  GK+P LRC  + +
Subjt:  QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYR

Query:  TGNMQLHEISLCFSKNGQVLIDCPFNAVACN
        T    L ++  CF+++G  LIDC  +    N
Subjt:  TGNMQLHEISLCFSKNGQVLIDCPFNAVACN

P42813 Ribonuclease 13.2e-1533.05Show/hide
Query:  LDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQL
        + + WP +   +    +FW +EW KHGTCS + + Q  YF   L +   ++L   L + GI P+G+ Y+   ++++I  + G  P + CN +  +GN QL
Subjt:  LDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQL

Query:  HEISLCFSKNGQVLIDCP
        +++ LC  ++G  LI+CP
Subjt:  HEISLCFSKNGQVLIDCP

P42815 Ribonuclease 32.1e-1431.75Show/hide
Query:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN
        ++  + + L ++WP +    N    FW +EW KHGTC+ + L Q  YF  GL +   ++L   L   GI P+ + Y    ++N I    G  P + CN +
Subjt:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN

Query:  YRTGNMQLHEISLCFSKNGQVLIDCP
          + N QL++I LC   +    I+CP
Subjt:  YRTGNMQLHEISLCFSKNGQVLIDCP

P80022 Extracellular ribonuclease LE4.4e-1736.22Show/hide
Query:  QILTIQARLDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFH-YFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNN
        QI  + + + Q+WP +   +    +FW +EW KHGTC+ + L+  H YF   L +    DL S L    I+P+G+ Y    ++NAI SA G  P ++CN 
Subjt:  QILTIQARLDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFH-YFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNN

Query:  NYRTGNMQLHEISLCFSKNGQVLIDCP
        + ++GN QL+++ +C   +G  LI+CP
Subjt:  NYRTGNMQLHEISLCFSKNGQVLIDCP

Arabidopsis top hitse value%identityAlignment
AT1G14220.1 Ribonuclease T2 family protein6.5e-1634.13Show/hide
Query:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN
        QI  + + L ++WP +    N   +FW +EW KHGTCS + + Q  YF   L +   ++L   L   GI P+   Y    + NAI    G  P + CN +
Subjt:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN

Query:  YRTGNMQLHEISLCFSKNGQVLIDCP
            N QLH+I +C   +G   I+CP
Subjt:  YRTGNMQLHEISLCFSKNGQVLIDCP

AT1G26820.1 ribonuclease 31.5e-1531.75Show/hide
Query:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN
        ++  + + L ++WP +    N    FW +EW KHGTC+ + L Q  YF  GL +   ++L   L   GI P+ + Y    ++N I    G  P + CN +
Subjt:  QILTIQARLDQDWPNMITQQNP--SFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNN

Query:  YRTGNMQLHEISLCFSKNGQVLIDCP
          + N QL++I LC   +    I+CP
Subjt:  YRTGNMQLHEISLCFSKNGQVLIDCP

AT2G02990.1 ribonuclease 12.2e-1633.05Show/hide
Query:  LDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQL
        + + WP +   +    +FW +EW KHGTCS + + Q  YF   L +   ++L   L + GI P+G+ Y+   ++++I  + G  P + CN +  +GN QL
Subjt:  LDQDWPNMI--TQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQL

Query:  HEISLCFSKNGQVLIDCP
        +++ LC  ++G  LI+CP
Subjt:  HEISLCFSKNGQVLIDCP

AT2G39780.1 ribonuclease 23.8e-0829.6Show/hide
Query:  QILTIQARLDQDWPNM-------ITQQNPSFWCYEWTKHGTCSS-AYLSQFHYFNFGLWVYTNSDLQSTLYQYG-IYPNGQQYTKTVVQNAIYSATGKWP
        +I T+   L++ WP++             SFW +EW KHGTCSS  +  +++YF   L +Y   ++   LYQ G +  N ++Y    +  AI +A    P
Subjt:  QILTIQARLDQDWPNM-------ITQQNPSFWCYEWTKHGTCSS-AYLSQFHYFNFGLWVYTNSDLQSTLYQYG-IYPNGQQYTKTVVQNAIYSATGKWP

Query:  ALRCNNNYRTGNMQLHEISLCFSKN
         + C  +       + EI +CF K+
Subjt:  ALRCNNNYRTGNMQLHEISLCFSKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGATATTGACGATTCAAGCTAGGTTAGACCAAGATTGGCCAAACATGATAACCCAACAAAACCCGTCGTTTTGGTGCTACGAGTGGACAAAGCACGGGACTTGTTCGAG
CGCGTATCTGAGCCAATTCCACTACTTCAATTTTGGACTATGGGTATATACCAATTCCGATCTGCAATCTACTCTGTATCAATATGGTATCTATCCCAATGGACAACAAT
ACACGAAGACAGTTGTCCAAAATGCAATTTATAGTGCAACGGGAAAGTGGCCAGCCCTTCGCTGCAACAACAACTACAGAACTGGTAACATGCAGTTGCATGAAATAAGT
TTGTGTTTCAGCAAGAATGGACAGGTTCTCATAGACTGCCCATTCAATGCCGTTGCATGCAAT
mRNA sequenceShow/hide mRNA sequence
CAGATATTGACGATTCAAGCTAGGTTAGACCAAGATTGGCCAAACATGATAACCCAACAAAACCCGTCGTTTTGGTGCTACGAGTGGACAAAGCACGGGACTTGTTCGAG
CGCGTATCTGAGCCAATTCCACTACTTCAATTTTGGACTATGGGTATATACCAATTCCGATCTGCAATCTACTCTGTATCAATATGGTATCTATCCCAATGGACAACAAT
ACACGAAGACAGTTGTCCAAAATGCAATTTATAGTGCAACGGGAAAGTGGCCAGCCCTTCGCTGCAACAACAACTACAGAACTGGTAACATGCAGTTGCATGAAATAAGT
TTGTGTTTCAGCAAGAATGGACAGGTTCTCATAGACTGCCCATTCAATGCCGTTGCATGCAAT
Protein sequenceShow/hide protein sequence
QILTIQARLDQDWPNMITQQNPSFWCYEWTKHGTCSSAYLSQFHYFNFGLWVYTNSDLQSTLYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQLHEIS
LCFSKNGQVLIDCPFNAVACN