; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1453 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1453
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L35a-1-like
Genome locationMC08:18204627..18206758
RNA-Seq ExpressionMC08g1453
SyntenyMC08g1453
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]3.66e-6896.12Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

XP_022139205.1 60S ribosomal protein L35a-1-like [Momordica charantia]2.20e-6997.09Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

XP_022156649.1 60S ribosomal protein L35a-1-like [Momordica charantia]2.68e-7099.03Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

XP_022156899.1 60S ribosomal protein L35a-1 [Momordica charantia]1.55e-6998.06Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

XP_022957040.1 60S ribosomal protein L35a-1 [Cucurbita moschata]3.66e-6896.12Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

TrEMBL top hitse value%identityAlignment
A0A5A7T1I6 Ribosomal protein L35A1.77e-6896.12Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

A0A6J1CBN5 60S ribosomal protein L35a-1-like1.07e-6997.09Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

A0A6J1DU58 60S ribosomal protein L35a-1-like1.30e-7099.03Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

A0A6J1DUY8 60S ribosomal protein L35a-17.51e-7098.06Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

A0A6J1IM24 60S ribosomal protein L35a-1-like1.77e-6896.12Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B4.1e-2652.94Show/hide
Query:  RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYPS
        RLY++G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  G+  R +WGKV R HGNSG+VRA F++NL  K+ G  VR+F+YPS
Subjt:  RLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYPS

Query:  NI
        NI
Subjt:  NI

P51422 60S ribosomal protein L35a-42.2e-4883.5Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

Q9C912 60S ribosomal protein L35a-37.7e-4984.47Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

Q9FZH0 60S ribosomal protein L35a-21.7e-4883.5Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

Q9LMK0 60S ribosomal protein L35a-17.7e-4984.47Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein5.4e-5084.47Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

AT1G41880.1 Ribosomal protein L35Ae family protein1.2e-4983.5Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

AT1G74270.1 Ribosomal protein L35Ae family protein5.4e-5084.47Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI

AT3G55750.1 Ribosomal protein L35Ae family protein1.6e-4983.5Show/hide
Query:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP
        +RLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNL PKSMG RVRVFMYP
Subjt:  IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYP

Query:  SNI
        SNI
Subjt:  SNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTAGACTCTACATCCGAGGAACAATTCTCGGCTACAAGAGGTCTAAATCCAACCAGTACCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGACGAGGT
TTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAGGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCTAGGCCTCATGGTAACA
GTGGCATTGTTAGAGCGAAGTTCAAGTCTAATCTGTCACCAAAGTCCATGGGTGACAGGGTCAGGGTATTCATGTACCCCAGCAACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATTAGACTCTACATCCGAGGAACAATTCTCGGCTACAAGAGGTCTAAATCCAACCAGTACCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGACGAGGT
TTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAGGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCTAGGCCTCATGGTAACA
GTGGCATTGTTAGAGCGAAGTTCAAGTCTAATCTGTCACCAAAGTCCATGGGTGACAGGGTCAGGGTATTCATGTACCCCAGCAACATTTGAGATAACTTTCTCTTTATC
CTTTTACCCTTTTGAAGTGAATGGTGTTGAAGTTTAGCGTTCACTGTATCTCACCTGTGAACCATACCGGGAAAAGCTAGTTTTATATTTTCCTATTTCTTGTTTAATGG
TGCTGAGCATCTGTTTATTTGTTATTTCCTAATATGTGCTTAATGTGTTTTTGCAGCGATGGAGAACCTAGATGAAACTACTGGAAGGGATTTTTATTTTTATTATATTT
TGTGAGCTAAGATAGAAGCATTTACTGTTTTCCGAACTGAGTAATTTTTGGCGTTTAGTGGATGTTTCACTCTCAAGTAGTTGAACAGAATTTTACAACCATTTGTCTTG
AGCATTTTCATGTGTTAAGCTATGTGGTTGCAGTTCCTATCAAGTGGTTTTCTCGTATACAAATCCTATGTACTTGTGTTATTCTAGTTCTTATTGGTAATTACTTTGTT
TTTTCTTTTCACTACCTTATTACTTGATGATCTGAAG
Protein sequenceShow/hide protein sequence
IRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLSPKSMGDRVRVFMYPSNI