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MC08g1485 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1485
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase
Genome locationMC08:19757922..19758171
RNA-Seq ExpressionMC08g1485
SyntenyMC08g1485
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]6.40e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]6.39e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]6.39e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]1.81e-2054.02Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WE-MIVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        R+RL +W++ VP TCV C  G++  DHLF +CP     W  MI W GSSHR+SYWSTEL WICH++   S+RR VW L WT  VS +
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WE-MIVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]6.39e-1947.13Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSGWEM----IVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDRL +WD S+P +C+LC    +  DHLFF CP GWE+    ++++ SSHRI YW  EL+WIC+    K  RR +W L W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSGWEM----IVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932253.09e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5A7TZS0 Reverse transcriptase domain-containing protein7.90e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDRL RWDSS+P +C+LC  GV+  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH    K  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5A7UP65 Reverse transcriptase3.10e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5D3D7P6 Reverse transcriptase3.10e-1949.43Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        RDR  RWDSSVP +C+LC  G++  DHLFF CP G   W  ++ +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WEMIVWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A6J1E271 uncharacterized protein LOC1110253248.78e-2154.02Show/hide
Query:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WE-MIVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        R+RL +W++ VP TCV C  G++  DHLF +CP     W  MI W GSSHR+SYWSTEL WICH++   S+RR VW L WT  VS +
Subjt:  RDRLCRWDSSVP-TCVLCWHGVQ--DHLFFECPSG---WE-MIVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGATCGTTTGTGTCGTTGGGACTCTTCTGTTCCTACTTGTGTTTTATGCTGGCATGGAGTCCAGGACCATCTTTTCTTTGAGTGCCCCTCTGGTTGGGAGATGATTGT
TTGGGTTGGTTCTTCTCATCGCATTTCATATTGGTCTACTGAGCTTGCTTGGATTTGTCACATTAGTACCAGAAAGTCTGCTCGTCGTTGTGTGTGGTGTTTGACGTGGA
CTTCAGCTGTTTCATTTATC
mRNA sequenceShow/hide mRNA sequence
AGGGATCGTTTGTGTCGTTGGGACTCTTCTGTTCCTACTTGTGTTTTATGCTGGCATGGAGTCCAGGACCATCTTTTCTTTGAGTGCCCCTCTGGTTGGGAGATGATTGT
TTGGGTTGGTTCTTCTCATCGCATTTCATATTGGTCTACTGAGCTTGCTTGGATTTGTCACATTAGTACCAGAAAGTCTGCTCGTCGTTGTGTGTGGTGTTTGACGTGGA
CTTCAGCTGTTTCATTTATC
Protein sequenceShow/hide protein sequence
RDRLCRWDSSVPTCVLCWHGVQDHLFFECPSGWEMIVWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI