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MC08g1488 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1488
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase
Genome locationMC08:19789828..19790033
RNA-Seq ExpressionMC08g1488
SyntenyMC08g1488
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026044.1 hypothetical protein E6C27_scaffold581G00300 [Cucumis melo var. makuwa]2.81e-1446.58Show/hide
Query:  CVLCWHGVQ--DHLFFECP---SGWEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  GV+  DHLFF CP     W  +  V  SSHRI +W  EL+WICH    K  RR +WC+ W + + FI
Subjt:  CVLCWHGVQ--DHLFFECP---SGWEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]2.99e-1245.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  G++  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]2.99e-1245.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  G++  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]2.49e-1654.79Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WE-MIAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        CV C  G++  DHLF +CP     W  MI+W GSSHR+SYWSTEL WICH++   S+RR VW L WT  VS +
Subjt:  CVLCWHGVQ--DHLFFECPSG---WE-MIAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]8.58e-1345.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSGWEM----IAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC    +  DHLFF CP GWE+    + ++ SSHRI YW  EL+WIC+    K  RR +W L W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSGWEM----IAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932251.45e-1245.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  G++  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5A7SK23 Uncharacterized protein1.36e-1446.58Show/hide
Query:  CVLCWHGVQ--DHLFFECP---SGWEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  GV+  DHLFF CP     W  +  V  SSHRI +W  EL+WICH    K  RR +WC+ W + + FI
Subjt:  CVLCWHGVQ--DHLFFECP---SGWEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5A7UP65 Reverse transcriptase1.45e-1245.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  G++  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A5D3D7P6 Reverse transcriptase1.45e-1245.21Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        C+LC  G++  DHLFF CP G   W  +  +  SSHRI +W  EL+WICH   RK  RR +W + W + + FI
Subjt:  CVLCWHGVQ--DHLFFECPSG---WEMIAWV-GSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

A0A6J1E271 uncharacterized protein LOC1110253241.20e-1654.79Show/hide
Query:  CVLCWHGVQ--DHLFFECPSG---WE-MIAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI
        CV C  G++  DHLF +CP     W  MI+W GSSHR+SYWSTEL WICH++   S+RR VW L WT  VS +
Subjt:  CVLCWHGVQ--DHLFFECPSG---WE-MIAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGTTTTATGCTGGCATGGAGTCCAGGACCATCTTTTCTTTGAGTGCCCCTCTGGTTGGGAGATGATTGCTTGGGTTGGTTCTTCTCATCGCATTTCATATTGGTCTAC
TGAGCTTGCTTGGATTTGTCACATTAGTACCAGAAAGTCTGCTCGTCGTTGTGTGTGGTGTTTGACGTGGACTTCAGCTGTTTCATTTATC
mRNA sequenceShow/hide mRNA sequence
TGTGTTTTATGCTGGCATGGAGTCCAGGACCATCTTTTCTTTGAGTGCCCCTCTGGTTGGGAGATGATTGCTTGGGTTGGTTCTTCTCATCGCATTTCATATTGGTCTAC
TGAGCTTGCTTGGATTTGTCACATTAGTACCAGAAAGTCTGCTCGTCGTTGTGTGTGGTGTTTGACGTGGACTTCAGCTGTTTCATTTATC
Protein sequenceShow/hide protein sequence
CVLCWHGVQDHLFFECPSGWEMIAWVGSSHRISYWSTELAWICHISTRKSARRCVWCLTWTSAVSFI