CuGenDBv2

Gene ID	MC08g1501
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribonuclease T(2)
Genome location	MC08:20652521..20652926
RNA-Seq Expression	MC08g1501
Synteny	MC08g1501
Gene Ontology terms	GO:0016070 - RNA metabolic process (biological process) GO:0003723 - RNA binding (molecular function) GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domains	IPR001568 - Ribonuclease T2-like IPR036430 - Ribonuclease T2-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147499.1 ribonuclease MC [Cucumis sativus]

1.65e-32

50.93

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +  +F L   F I +S+    FWFVQQWPP VC   S  CV    +SFT HG+WPQ  GRSV  C G+QF + KI  L+N LN VWP+V+ GNN+ FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

XP_008443402.1 PREDICTED: ribonuclease MC-like [Cucumis melo]

3.65e-31

48.15

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +  +F L   F I +S+   +FWFVQQWPP +C   S  CV    +SFT HG+WPQ  GRSV  C G+ F + KI  L++ LN VWP+V+ GNN+ FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

XP_022142280.1 ribonuclease MC-like [Momordica charantia]

4.46e-33

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +M   T+  FF + +S+A  +FWFVQQWPP VC F    CV    ++FT HG+WPQ  G SV  C G++F + ++  L+N LNRVWP+VI GNNR FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

XP_022158909.1 ribonuclease MC-like [Momordica charantia]

3.65e-35

52.78

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        I+ + TL   F +  S+   SFWFVQQWPPGVC F    CVQP  +SFT HG+WPQ    S  GCHG+ F++DKI  L++ LN  WPDVI GN + FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH  C
Subjt:  QWNKHRVC

XP_038905534.1 ribonuclease MC-like [Benincasa hispida]

9.12e-32

50.93

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        ++L+F L   F I +S+    FWFVQQWPP VC   S  CV    +SFT HG+WPQ  G SV  C G+ F + KI  L+N LN VWP+VI GNN+ FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LC37 Ribonuclease T(2)

8.00e-33

50.93

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +  +F L   F I +S+    FWFVQQWPP VC   S  CV    +SFT HG+WPQ  GRSV  C G+QF + KI  L+N LN VWP+V+ GNN+ FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

A0A1S3B8Q3 Ribonuclease T(2)

1.77e-31

48.15

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +  +F L   F I +S+   +FWFVQQWPP +C   S  CV    +SFT HG+WPQ  GRSV  C G+ F + KI  L++ LN VWP+V+ GNN+ FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

A0A6J1CKH7 Ribonuclease T(2)

2.16e-33

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        +M   T+  FF + +S+A  +FWFVQQWPP VC F    CV    ++FT HG+WPQ  G SV  C G++F + ++  L+N LNRVWP+VI GNNR FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH +C
Subjt:  QWNKHRVC

A0A6J1DQN7 ribonuclease MC-like

1.77e-31

50.47

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Query:  MLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIAQ
        M +  +  F  I +S+    FWFVQQWPP VC F    CV    ++FT HGVWPQ  G SV  C G+ F + KI SL+  LNRVWP+VI G+N+ FW  +
Subjt:  MLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIAQ

Query:  WNKHRVC
        WNKH VC
Subjt:  WNKHRVC

A0A6J1E0T7 Ribonuclease T(2)

1.77e-35

52.78

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Query:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA
        I+ + TL   F +  S+   SFWFVQQWPPGVC F    CVQP  +SFT HG+WPQ    S  GCHG+ F++DKI  L++ LN  WPDVI GN + FW  
Subjt:  IMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHS--CVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIA

Query:  QWNKHRVC
        +WNKH  C
Subjt:  QWNKHRVC

SwissProt top hits

e value

%identity

Alignment

C0HKG5 Ribonuclease T2-A

5.6e-10

38.55

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Query:  QQWPPGVCKFHSCVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIY--GNNRNFWIAQWNKHRVC
        Q WPP VCK  +  Q     +T HG+WP       Q  H   F+ D+IK L   +   WPDVI+   N   FW  +W KH  C
Subjt:  QQWPPGVCKFHSCVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIY--GNNRNFWIAQWNKHRVC

C0HKG6 Ribonuclease T2-B

5.6e-10

38.55

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Query:  QQWPPGVCKFHSCVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIY--GNNRNFWIAQWNKHRVC
        Q WPP VCK  +  Q     +T HG+WP       Q  H   F+ D+IK L   +   WPDVI+   N   FW  +W KH  C
Subjt:  QQWPPGVCKFHSCVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIY--GNNRNFWIAQWNKHRVC

P23540 Ribonuclease MC

4.1e-21

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Query:  SFWFVQQWPPGVCKFH---SCVQPVPQSFTTHGVWPQYRGRSVQGC-HGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIAQWNKHRVC
        SFWFVQQWPP VC F    SC     ++FT HG+WPQ  G S+  C  GS F   KI  L++QLN +WP+V+  NN+ FW  +W KH  C
Subjt:  SFWFVQQWPPGVCKFH---SCVQPVPQSFTTHGVWPQYRGRSVQGC-HGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIAQWNKHRVC

P42814 Ribonuclease 2

4.4e-07

30.93

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Query:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDV-------IYGNNRNFWIAQWNKHRVC
        QWP   C+   H C +         P  FT HG+WP Y  G     C+ S F   +I +L + L + WP +         G   +FW  +W KH  C
Subjt:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDV-------IYGNNRNFWIAQWNKHRVC

Arabidopsis top hits

e value

%identity

Alignment

AT2G39780.1 ribonuclease 2

3.1e-08

30.93

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Query:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDV-------IYGNNRNFWIAQWNKHRVC
        QWP   C+   H C +         P  FT HG+WP Y  G     C+ S F   +I +L + L + WP +         G   +FW  +W KH  C
Subjt:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDV-------IYGNNRNFWIAQWNKHRVC

AT2G39780.2 ribonuclease 2

3.2e-05

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Query:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGN
        QWP   C+   H C +         P  FT HG+WP Y  G     C+ S F   +I +L + L + WP +  G+
Subjt:  QWPPGVCK--FHSCVQ-------PVPQSFTTHGVWPQYR-GRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGN

Sequences

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CDS sequence

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CAAATTATGCTAATCTTTACCTTAATTACTTTTTTCTCTATTGATGAATCAAAAGCTTGCCATAGTTTTTGGTTCGTTCAACAATGGCCACCAGGGGTTTGTAAATTTCA
TTCATGTGTCCAACCAGTGCCACAATCATTTACAACGCATGGCGTGTGGCCTCAATATAGGGGGAGATCTGTACAAGGTTGTCATGGATCTCAATTCTCGTGGGACAAGA
TAAAATCTTTAAAAAATCAGCTAAATAGAGTTTGGCCAGATGTAATATATGGAAATAATAGAAATTTTTGGATTGCACAGTGGAACAAGCACAGGGTTTGC

mRNA sequence

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Protein sequence

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QIMLIFTLITFFSIDESKACHSFWFVQQWPPGVCKFHSCVQPVPQSFTTHGVWPQYRGRSVQGCHGSQFSWDKIKSLKNQLNRVWPDVIYGNNRNFWIAQWNKHRVC

MC08g1501 (gene) of Bitter gourd (Dali-11) v1 genome