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MC08g1504 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1504
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC08:20779015..20779374
RNA-Seq ExpressionMC08g1504
SyntenyMC08g1504
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA10891.1 ribonuclease (RNase LC1) [Luffa aegyptiaca]3.43e-3250Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        I+HLE+ LN  WP+VI G N  FW  EWN H I SVSKF+Q AYFQ++INM N + LL+ L +  + PN  ++ +     A++ Q G +P LRC+    Q
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
        + L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
XP_004147499.1 ribonuclease MC [Cucumis sativus]4.64e-3352.07Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-
        I HLENDLN VWP+V+ G N  FW  EWN H I S SKF++  YFQ +INM +G+ LL+ L    +GPN  ++     + A+   FG  P LRCK A   
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-

Query:  QALLVEIVMCFDEDGFTLIDC
        Q LL EIVMCFD+DG TLI+C
Subjt:  QALLVEIVMCFDEDGFTLIDC
XP_022142280.1 ribonuclease MC-like [Momordica charantia]1.10e-3450.83Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        ++HL+NDLNRVWP+VI G N  FW  EWN H I S SKF+  AYFQ++INM + L L+  L +  L PN  T+ +     A++ QFG +P LRC+     
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
          L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
XP_022155091.1 ribonuclease MC-like [Momordica charantia]3.62e-3249.17Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        I+ LE DLNRVWP+VI G N  FW  EWN H + S SKFN  AYFQ++INM N + L+  L +  L PN  ++ +     A++  FG +P LRC+   + 
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
          L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
XP_038905534.1 ribonuclease MC-like [Benincasa hispida]2.89e-3150.41Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACDAV-KMQFGTKPFLRCKIAHT-
        I HLENDLN VWP+VI G N  FW  EWN H I S SKF+Q AYFQ +INM + + LL+ +    + PN  ++     ++V    FG  P LRCK A   
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACDAV-KMQFGTKPFLRCKIAHT-

Query:  QALLVEIVMCFDEDGFTLIDC
        Q LL E+VMCFD+DG TL++C
Subjt:  QALLVEIVMCFDEDGFTLIDC
TrEMBL top hitse value%identityAlignment
A0A0A0LC37 Ribonuclease T(2)2.24e-3352.07Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-
        I HLENDLN VWP+V+ G N  FW  EWN H I S SKF++  YFQ +INM +G+ LL+ L    +GPN  ++     + A+   FG  P LRCK A   
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-

Query:  QALLVEIVMCFDEDGFTLIDC
        Q LL EIVMCFD+DG TLI+C
Subjt:  QALLVEIVMCFDEDGFTLIDC
A0A5A7UJY4 Ribonuclease MC-like1.35e-3048.76Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-
        I HLE+DLN VWP+V+ G N  FW  EWN H I S SKF+Q  YFQ +INM + + LL+ L    + PN  ++     + A+   F   P LRCK A   
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT-

Query:  QALLVEIVMCFDEDGFTLIDC
        Q LL EIV+CFD+DG TLI+C
Subjt:  QALLVEIVMCFDEDGFTLIDC
A0A6J1CKH7 Ribonuclease T(2)5.35e-3550.83Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        ++HL+NDLNRVWP+VI G N  FW  EWN H I S SKF+  AYFQ++INM + L L+  L +  L PN  T+ +     A++ QFG +P LRC+     
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
          L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
A0A6J1DQN7 ribonuclease MC-like1.75e-3249.17Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        I+ LE DLNRVWP+VI G N  FW  EWN H + S SKFN  AYFQ++INM N + L+  L +  L PN  ++ +     A++  FG +P LRC+   + 
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
          L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
Q40115 Ribonuclease (RNase LC1)1.66e-3250Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ
        I+HLE+ LN  WP+VI G N  FW  EWN H I SVSKF+Q AYFQ++INM N + LL+ L +  + PN  ++ +     A++ Q G +P LRC+    Q
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTR-QWHACDAVKMQFGTKPFLRCKIAHTQ

Query:  ALLVEIVMCFDEDGFTLIDC
        + L+EIVMCFD+DG TLI+C
Subjt:  ALLVEIVMCFDEDGFTLIDC
SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC3.9e-2040.16Show/hide
Query:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACDA-VKMQFGTKPFLRCKI--AH
        I+HL++ LN +WP+V+   N  FW  EW  H   S S FNQ AYF+++++M N   ++  L     GPN  T+   A    +K +FG  P LRC+     
Subjt:  ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACDA-VKMQFGTKPFLRCKI--AH

Query:  TQALLVEIVMCFDEDGFTLIDC
          + LV++V CF +DG TLIDC
Subjt:  TQALLVEIVMCFDEDGFTLIDC
P80022 Extracellular ribonuclease LE9.9e-0827.42Show/hide
Query:  ITHLENDLNRVWPDVI--NGRNMNFWLGEWNMHVIYSVSKF-NQNAYFQISINMINGLHLLATLTLARLGPNNNTRQW-HACDAVKMQFGTKPFLRCKIA
        I+ L + + + WP +   +G    FW  EW  H   + S   NQ+AYF+ ++++ N + LL+ L  A + P+  +    +  +A+K   G  P+++C + 
Subjt:  ITHLENDLNRVWPDVI--NGRNMNFWLGEWNMHVIYSVSKF-NQNAYFQISINMINGLHLLATLTLARLGPNNNTRQW-HACDAVKMQFGTKPFLRCKIA

Query:  HT-QALLVEIVMCFDEDGFTLIDC
         +  + L ++ +C D  G +LI+C
Subjt:  HT-QALLVEIVMCFDEDGFTLIDC
Q38716 Ribonuclease S-21.0e-0425.62Show/hide
Query:  LENDLNRVWPDVINGR----NMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT
        L  DL   WPD+   +       FW+ +W  H   ++  ++ N YF  ++ +    ++L  L+   L P +        + A+    G    L+C     
Subjt:  LENDLNRVWPDVINGR----NMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACD-AVKMQFGTKPFLRCKIAHT

Query:  QALLVEIVMCFDEDGFTLIDC
        +  L E+++CFD  GF +IDC
Subjt:  QALLVEIVMCFDEDGFTLIDC
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACACATTTAGAAAATGATCTGAATAGAGTTTGGCCAGATGTAATAAATGGACGGAATATGAACTTTTGGCTTGGAGAGTGGAATATGCATGTGATTTACTCTGTGAG
TAAGTTCAATCAAAACGCATACTTTCAAATCTCCATTAATATGATTAATGGTCTTCACCTTCTTGCTACCCTCACACTTGCTCGGCTAGGGCCAAATAATAACACGAGAC
AGTGGCATGCATGTGACGCAGTCAAAATGCAATTTGGGACCAAACCATTTCTTCGCTGCAAAATAGCTCATACACAAGCCCTATTAGTGGAGATTGTGATGTGTTTCGAT
GAGGATGGTTTCACTCTAATTGATTGC
mRNA sequenceShow/hide mRNA sequence
ATTACACATTTAGAAAATGATCTGAATAGAGTTTGGCCAGATGTAATAAATGGACGGAATATGAACTTTTGGCTTGGAGAGTGGAATATGCATGTGATTTACTCTGTGAG
TAAGTTCAATCAAAACGCATACTTTCAAATCTCCATTAATATGATTAATGGTCTTCACCTTCTTGCTACCCTCACACTTGCTCGGCTAGGGCCAAATAATAACACGAGAC
AGTGGCATGCATGTGACGCAGTCAAAATGCAATTTGGGACCAAACCATTTCTTCGCTGCAAAATAGCTCATACACAAGCCCTATTAGTGGAGATTGTGATGTGTTTCGAT
GAGGATGGTTTCACTCTAATTGATTGC
Protein sequenceShow/hide protein sequence
ITHLENDLNRVWPDVINGRNMNFWLGEWNMHVIYSVSKFNQNAYFQISINMINGLHLLATLTLARLGPNNNTRQWHACDAVKMQFGTKPFLRCKIAHTQALLVEIVMCFD
EDGFTLIDC