; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1510 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1510
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosome biogenesis protein WDR12 homolog
Genome locationMC08:20857468..20858689
RNA-Seq ExpressionMC08g1510
SyntenyMC08g1510
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155078.1 ribosome biogenesis protein WDR12 homolog [Momordica charantia]1.54e-10688.82Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVR WDVETGKDLFNI C   LS CLDIGGEGSTLIAAGGSDP +RIWDPRK  +SGP+FQFLSHSSWVS
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWHDRSWFHLLSASYDGKAMLWDLRTAWPL V+DSHKDKVLSADWWKG+NVISGG DSRL ISSG+YV
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

XP_022948382.1 ribosome biogenesis protein WDR12 homolog [Cucurbita moschata]1.44e-9680Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVL+ADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

XP_022997784.1 ribosome biogenesis protein WDR12 homolog [Cucurbita maxima]5.08e-9780.59Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVLSADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

XP_023523745.1 ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]5.08e-9780.59Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVLSADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

XP_023525175.1 ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]1.44e-9680Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVL+ADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

TrEMBL top hitse value%identityAlignment
A0A0A0KYI3 Ribosome biogenesis protein WDR12 homolog1.47e-9378.82Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATL GH+Q VSSVAWPKH EIYS SWDHSVR WDVETG  LFN VC   L+ CLDIGGEGS+LIAAGGSDP +RIWDPRK  +S PIFQF SH+SWVS
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWHD+SWFHLLSASYDGK MLWDLRTAWPL V+DSH DKVLSADWWK ++++SGGADS+LRISSG+YV
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

A0A1S3B4A1 Ribosome biogenesis protein WDR12 homolog2.96e-9378.82Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATL GH+Q VSSVAWPKH EIYS SWDHSVR WDVETG  LFN VC   L+ CLDIGGEGS+LIAAGGSDP +RIWDPRK  +S PIFQF SH+SWVS
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWH++SWFHLLSASYDGK MLWDLRTAWPL V+DSHKDKVLSADWWK ++V+SGGADS+L ISSG+YV
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

A0A6J1DM12 Ribosome biogenesis protein WDR12 homolog7.44e-10788.82Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVR WDVETGKDLFNI C   LS CLDIGGEGSTLIAAGGSDP +RIWDPRK  +SGP+FQFLSHSSWVS
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWHDRSWFHLLSASYDGKAMLWDLRTAWPL V+DSHKDKVLSADWWKG+NVISGG DSRL ISSG+YV
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

A0A6J1G934 Ribosome biogenesis protein WDR12 homolog6.98e-9780Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVL+ADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

A0A6J1KCJ3 Ribosome biogenesis protein WDR12 homolog2.46e-9780.59Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        SVATLVGHTQCVS+V WP+HGEIYSASWDHS+R WDVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDP VRIWDPRK  +S PIFQFLSH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
        +CKWHD+S FHLLSASYDGK  LWDLRTAWPL V+DSHKDKVLSADWWKG++V+SGGADS+LRIS G+ V
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

SwissProt top hitse value%identityAlignment
A8IR43 Ribosome biogenesis protein WDR12 homolog1.7e-2938.2Show/hide
Query:  ATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETG--KDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSG----PIFQFLSHSSW
        A L GH  CVSSVAWP    ++S  WDHSVR WDV +G   D +N        +C+        L+A G SD  +R+WD R  +G     +    +H  W
Subjt:  ATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETG--KDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSG----PIFQFLSHSSW

Query:  VSTCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKG------NNVISGGADSRLRISSGVYV
        V+   W   S  H+ SAS+DG   +WD+RT  PL ++  H DKVL+  W  G        ++SGGAD +LR+    Y+
Subjt:  VSTCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKG------NNVISGGADSRLRISSGVYV

P61480 Ribosome biogenesis protein WDR124.2e-2839.41Show/hide
Query:  VATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVE--------TGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPI--FQFL
        + TL GHT+ +SSV W    E+ SASWDH+VR+WDVE        TG  +FN  C     +C          +A+G +D  +R+WDPR   G +      
Subjt:  VATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVE--------TGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPI--FQFL

Query:  SHSSWVSTCKWHDRSWFHLLSASYDGKAMLWDLRTA-WPLVVMDSHKDKVLSADWWKGNNVISGGADSRL
        SH+ WV++ KW       L+S S D    LWD R+   PL  + +H+DKVLS DW     ++SGGAD++L
Subjt:  SHSSWVSTCKWHDRSWFHLLSASYDGKAMLWDLRTA-WPLVVMDSHKDKVLSADWWKGNNVISGGADSRL

Q8H594 Ribosome biogenesis protein WDR12 homolog4.1e-6866.47Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        + +T +GHTQCVS+V WP+   IYSASWDHSVR WDV+TGK+ +N+V    L+ CLD GGE S+LIAAGGSDP++R+WDPRK  +  PIFQF SH SW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWH  SWFHL+S+S+DGK MLWDLRTAWPL  ++SHKDKVL ADWWKG++VISGGADS+L I+SG+ +
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

Q9JJA4 Ribosome biogenesis protein WDR127.1e-2839.41Show/hide
Query:  VATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVE--------TGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPI--FQFL
        + TL GHT+ +SSV W    EI SASWDH++R+WDVE        TG  +FN  C     +C          +A+G +D  +R+WDPR   G +      
Subjt:  VATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVE--------TGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPI--FQFL

Query:  SHSSWVSTCKWHDRSWFHLLSASYDGKAMLWDLRTA-WPLVVMDSHKDKVLSADWWKGNNVISGGADSRL
        SH+ WV++ KW       L+S S D    LWD R+   PL  + +H+DKVLS DW     ++SGGAD++L
Subjt:  SHSSWVSTCKWHDRSWFHLLSASYDGKAMLWDLRTA-WPLVVMDSHKDKVLSADWWKGNNVISGGADSRL

Q9LF27 Ribosome biogenesis protein WDR12 homolog1.9e-7372.35Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        +V +LVGHTQCVSSV WP+H  IYS+SWDHSVR WDVETGKD  N+ C   L+  +D+GGE S LIAAGGSDPI+R+WDPRK  +S P+FQF SHSSW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWH  SWFHLLSASYDGK MLWDLRTAWPL V+D+H DKVLSADWWKG +V+SGGADS LRISSG+ +
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

Arabidopsis top hitse value%identityAlignment
AT2G43770.1 Transducin/WD40 repeat-like superfamily protein2.8e-1127.81Show/hide
Query:  LVGHTQCVSSVAWPKHG-EIYSASWDHSVRIWDVETGKDL--------FNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSS
        L GH   +  + W   G +I SAS D +VR WDVETGK +        F   C PT          G  LI +G  D   ++WD R+      Q      
Subjt:  LVGHTQCVSSVAWPKHG-EIYSASWDHSVRIWDVETGKDL--------FNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSS

Query:  WVSTCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKV----LSADWWKGNNVISGGADSRL
         ++   + D +   + +   D    +WDLR     + ++ H+D +    LS D   G+ +++ G D++L
Subjt:  WVSTCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKV----LSADWWKGNNVISGGADSRL

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein2.1e-1128.05Show/hide
Query:  VATLVGHTQCVSSVAWPKHGE-IYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSSWVSTC
        V    GH   +S VA+      I SAS D ++++WDVETG  +  ++     + C++   + S +I +G  D  VRIWD   ++G   + L   S   T 
Subjt:  VATLVGHTQCVSSVAWPKHGE-IYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSSWVSTC

Query:  KWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNN--VISGGADSRLRI
           +R    ++S+SYDG   +WD  T   +  +   ++  +S   +  N   ++ G  D+ LR+
Subjt:  KWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNN--VISGGADSRLRI

AT5G15550.1 Transducin/WD40 repeat-like superfamily protein1.4e-7472.35Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        +V +LVGHTQCVSSV WP+H  IYS+SWDHSVR WDVETGKD  N+ C   L+  +D+GGE S LIAAGGSDPI+R+WDPRK  +S P+FQF SHSSW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV
         CKWH  SWFHLLSASYDGK MLWDLRTAWPL V+D+H DKVLSADWWKG +V+SGGADS LRISSG+ +
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV

AT5G15550.2 Transducin/WD40 repeat-like superfamily protein4.5e-5469.57Show/hide
Query:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS
        +V +LVGHTQCVSSV WP+H  IYS+SWDHSVR WDVETGKD  N+ C   L+  +D+GGE S LIAAGGSDPI+R+WDPRK  +S P+FQF SHSSW+S
Subjt:  SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRK--SSGPIFQFLSHSSWVS

Query:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSH
         CKWH  SWFHLLSASYDGK MLWDLRTA    VM  H
Subjt:  TCKWHDRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSH

AT5G52820.1 WD-40 repeat family protein / notchless protein, putative1.8e-1022.56Show/hide
Query:  TLVGHTQCVSSVAWPKHG-EIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSSWVSTCKW
        T+ GH + V  V++   G ++ S S D +VR+WD+ T   LF         + +    +G  L++   S  I   W+P+K          H  W++   W
Subjt:  TLVGHTQCVSSVAWPKHG-EIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSSWVSTCKW

Query:  H----DRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRI
                    +++S DG A +WD+     ++ +  H   V    W     + +G  D  +++
Subjt:  H----DRSWFHLLSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCGTTGCTACACTTGTTGGCCACACACAATGCGTGTCGTCAGTTGCTTGGCCAAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAATATGGGATGT
CGAGACAGGCAAAGATCTGTTTAATATTGTATGCTCTCCAACTCTTTCCATCTGCCTCGATATCGGAGGTGAAGGTTCCACTCTCATTGCCGCGGGTGGCTCAGACCCCA
TCGTTAGGATATGGGATCCTCGTAAGAGTTCTGGTCCTATCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAACTTGCAAGTGGCATGATAGATCTTGGTTTCATTTG
CTCTCTGCATCATATGATGGGAAAGCTATGTTGTGGGATCTGAGAACTGCGTGGCCTTTAGTTGTAATGGACTCTCACAAAGACAAAGTACTATCAGCTGACTGGTGGAA
GGGCAACAATGTTATCAGTGGCGGGGCGGATTCGAGATTGCGCATTTCATCGGGAGTTTATGTA
mRNA sequenceShow/hide mRNA sequence
TCCGTTGCTACACTTGTTGGCCACACACAATGCGTGTCGTCAGTTGCTTGGCCAAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAATATGGGATGT
CGAGACAGGCAAAGATCTGTTTAATATTGTATGCTCTCCAACTCTTTCCATCTGCCTCGATATCGGAGGTGAAGGTTCCACTCTCATTGCCGCGGGTGGCTCAGACCCCA
TCGTTAGGATATGGGATCCTCGTAAGAGTTCTGGTCCTATCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAACTTGCAAGTGGCATGATAGATCTTGGTTTCATTTG
CTCTCTGCATCATATGATGGGAAAGCTATGTTGTGGGATCTGAGAACTGCGTGGCCTTTAGTTGTAATGGACTCTCACAAAGACAAAGTACTATCAGCTGACTGGTGGAA
GGGCAACAATGTTATCAGTGGCGGGGCGGATTCGAGATTGCGCATTTCATCGGGAGTTTATGTA
Protein sequenceShow/hide protein sequence
SVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRIWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPIVRIWDPRKSSGPIFQFLSHSSWVSTCKWHDRSWFHL
LSASYDGKAMLWDLRTAWPLVVMDSHKDKVLSADWWKGNNVISGGADSRLRISSGVYV