; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1532 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1532
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein 24-A
Genome locationMC08:21673997..21679609
RNA-Seq ExpressionMC08g1532
SyntenyMC08g1532
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599081.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]5.19e-19693.31Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPA YVGGMQPNRG +IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LTSSP+PTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_004146763.1 RNA-binding protein 24-A [Cucumis sativus]1.09e-19793.71Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA
        RANCNLASLGRPRPP+SYG  RLR PA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SP 
Subjt:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA

Query:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNALTSSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_008464801.1 PREDICTED: RNA-binding protein 24-A [Cucumis melo]2.20e-19793.71Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA
        RANCNLASLGRPRPPIS+G  RLR PA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SP 
Subjt:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA

Query:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNALTSSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_022155905.1 RNA-binding protein 24-A [Momordica charantia]1.11e-210100Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_022946505.1 RNA-binding protein 24-A [Cucurbita moschata]4.12e-19793.31Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPA YVGGMQPNRG +IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LTSSP+PTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

TrEMBL top hitse value%identityAlignment
A0A1S3CME8 RNA-binding protein 24-A1.06e-19793.71Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA
        RANCNLASLGRPRPPIS+G  RLR PA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SP 
Subjt:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA

Query:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNALTSSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A5D3CHF9 RNA-binding protein 24-A1.75e-19593.71Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA
        RANCNLASLGRPRPPIS+G  RLR PA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SP 
Subjt:  RANCNLASLGRPRPPISYG--RLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPA

Query:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNALTSSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1DNT6 RNA-binding protein 24-A5.38e-211100Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1G3W1 RNA-binding protein 24-A1.99e-19793.31Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPA YVGGMQPNRG +IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LTSSP+PTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1KGG8 RNA-binding protein 24-A3.86e-19591.9Show/hide
Query:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKN+GRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY
        RANCNLASLGRPRPPISYGRLRPPA YVGGMQPNRG + GNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SPAIY
Subjt:  RANCNLASLGRPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIY

Query:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYG VHGY MPSPQI+QF GPNVN LTSSP+PTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 243.5e-2738.39Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY
        DTTYTK+FVGGL + T   ++R++FE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY

Query:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYP--------PYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTV-PGGHGYGTV
         G  Q +       FG   P  Y Y Q    P        P   AA    YI        + G  Y Q Y    + + A   Y Q      P   GY T 
Subjt:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYP--------PYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTV-PGGHGYGTV

Query:  HGYAMPSPQIVQFSGPNVNALTSS
         GY+    Q +  + P   A  ++
Subjt:  HGYAMPSPQIVQFSGPNVNALTSS

Q5ZMA3 RNA-binding protein 241.7e-2644.32Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY
        DTTYTK+FVGGL + T   ++R++FE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG  +P I           
Subjt:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY

Query:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYG
           MQP        FG QQ         L   P+G  A+   Y+YPQ    P +   ++Q      ST+P I + G
Subjt:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYG

Q6GQD3 RNA-binding protein 24-A4.6e-2737.67Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY
        DTTYTK+FVGGL + T   ++R++FE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY

Query:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQ
         G  Q +       FG   P  Y Y Q    P        P        Y  +    Y Q      + +   Y Y       P   GY T  GY    PQ
Subjt:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQ

Query:  IVQFSGPNVNALTSS
         +  + P   A  ++
Subjt:  IVQFSGPNVNALTSS

Q9BX46 RNA-binding protein 242.1e-2738.84Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY
        DTTYTK+FVGGL + T   ++R++FE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAPY

Query:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYP--------PYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTV-PGGHGYGTV
         G  Q +       FG   P  Y Y Q    P        P   AA    YI        + G  Y Q Y    + + A   Y Q      P   GY T 
Subjt:  VGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYP--------PYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTV-PGGHGYGTV

Query:  HGYAMPSPQIVQFSGPNVNALTSS
         GY     Q +  + P   A  ++
Subjt:  HGYAMPSPQIVQFSGPNVNALTSS

Q9M1S3 Probable RNA-binding protein ARP14.7e-3246.15Show/hide
Query:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        T+S  +N  FGDT  TKVFVGGLAW+T  E M  HF ++G+ILEAV+I+DK T RSKGYGFVTF+D ++A RAC D TPII+GRRANCNLASLG      
Subjt:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGRLRP----PAPYVGGMQPNRGT--FIGNFG-YQQPVSYAYQQ-----GLAYPPYGY--AAYGPEYIYPQG-GY--NPFLGQQYLQIYGMPGS-TSPA
          GRLR      +P  G    NR T   +GN   +  P  +  QQ       A P YGY  A   P   + Q  GY    ++   Y Q+   P S   P 
Subjt:  SYGRLRP----PAPYVGGMQPNRGT--FIGNFG-YQQPVSYAYQQ-----GLAYPPYGY--AAYGPEYIYPQG-GY--NPFLGQQYLQIYGMPGS-TSPA

Query:  IYHYGQLG
         YH+   G
Subjt:  IYHYGQLG

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-9159.66Show/hide
Query:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID
        MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RRHF+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIID
Subjt:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID

Query:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY
        GRRANCNLASLGR RPP+ Y       GR+RPP+PYVG +Q  RG   G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+Y
Subjt:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY

Query:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        G+PG+ +   Y YGQL  T+PG HGY    GY+ P   ++Q          +SP+  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-9159.66Show/hide
Query:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID
        MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RRHF+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIID
Subjt:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID

Query:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY
        GRRANCNLASLGR RPP+ Y       GR+RPP+PYVG +Q  RG   G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+Y
Subjt:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY

Query:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        G+PG+ +   Y YGQL  T+PG HGY    GY+ P   ++Q          +SP+  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-4845.96Show/hide
Query:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--
        +++ +  SPFGDTT+TKVFVGGLAWET ++ MRR+F+QFGEILEAV+ITDK TG+SKGYGFVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP  
Subjt:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--

Query:  PISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQ-QYL--QIYGMPGSTSPAI-------YHYGQ
        P   G+   P+ Y GG Q +        G   PV  A    L YP YGY  Y  EY Y Q  YN  L Q QY   Q+YG  G+TSP+        Y+Y Q
Subjt:  PISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQ-QYL--QIYGMPGSTSPAI-------YHYGQ

Query:  LGQTVPGGH---GYGTVH--------GYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSG
             P  H    Y   H           +PS         NV A T S VPT Q P  S   +          H+P Q  +  G
Subjt:  LGQTVPGGH---GYGTVH--------GYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSG

AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.0e-10765.31Show/hide
Query:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID
        MAYQ +PG          SGF  LNSPFGDTT+TKVFVGGLAWETQSET+R+HFEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIID
Subjt:  MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIID

Query:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY
        GRRANCNLASLGRPRPP+ Y       GRLRP +PY+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG  AYGPEY+Y   QG Y+P++GQQYLQ+Y
Subjt:  GRRANCNLASLGRPRPPISY-------GRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIY--PQGGYNPFLGQQYLQIY

Query:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS
        G+PG+ +  +Y YGQL QT+P GHGY  V GY++P   I+Q  GP V+ +T+S +P +QAPYPSGIP P   Q   +VHSP QF+Q + SDQT+
Subjt:  GMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS

AT1G78260.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-4647.62Show/hide
Query:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P
        + + +  SPFGDTTYTKVFVGGLAWET ++ MRR+FEQFGEILEAV+ITDKNTG+SKGYGFVTFR+ +SA RA ADP P+IDGR+ANCN+AS GRPR  P
Subjt:  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P

Query:  PISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLG-----QQYLQIYGMPGSTSPAI---------Y
        P   G+   P+ Y  G  P+  T     G   P+  A    L YP YGY     ++ Y Q  YN  L      QQ  Q+YG  G+TSP+          Y
Subjt:  PISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLG-----QQYLQIYGMPGSTSPAI---------Y

Query:  HYGQLGQT--VPGGHGYGTVHGYAMPSPQIVQFSGPN--VNALTSSPVPTIQ
        +YG   Q   VP  H +     Y        +FS P+  V    SS  P +Q
Subjt:  HYGQLGQT--VPGGHGYGTVHGYAMPSPQIVQFSGPN--VNALTSSPVPTIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATCAGCATATTCCGGGCCCGAGTTCGATATCTGGATCAAGTACCAGTTCTGGGTTCTTGAACTCTCCTTTTGGTGATACCACCTACACCAAGGTCTTTGTTGG
TGGATTAGCCTGGGAGACTCAGAGCGAAACTATGAGGCGCCACTTTGAGCAGTTTGGAGAGATTCTTGAGGCTGTTGTCATAACAGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTCGTGACTTTCCGTGATCCAGAGTCTGCTAGAAGAGCTTGTGCTGATCCCACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGC
CGGCCTCGGCCACCTATATCCTATGGACGTCTAAGACCGCCTGCACCATATGTTGGAGGCATGCAGCCCAACAGGGGAACTTTTATTGGAAATTTTGGCTATCAGCAACC
GGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTATGCTGCATATGGACCTGAGTACATCTACCCACAGGGTGGATACAACCCTTTTCTGGGTCAGC
AATACCTGCAGATATATGGAATGCCTGGGTCAACGAGCCCTGCTATTTATCATTATGGACAATTAGGTCAAACGGTCCCTGGTGGTCATGGATATGGAACAGTACATGGA
TATGCAATGCCGAGTCCTCAGATTGTGCAGTTTAGTGGTCCTAATGTCAATGCGCTAACATCTTCTCCAGTGCCTACTATTCAAGCACCATATCCTTCAGGGATTCCAGC
ACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATTGGGGAGTATCCGAATGGAAATCCCGTAAAACTCGACGGTCCGTCAATCACAACAACAACAACAAAACACAAAACTACAACACACAGCCATGAAAAACCAATTTCTAA
ACCCTTTCCTCCTCCTCCTCCTCCCCCTTCCCCTCTCCTCCTCCGCCGTCGCCGCCGCCGCCGCCGCCATCACCACCACCTCCGCCTCCGCCAACTTGGTATTCCCCATG
AACATGAACATGAACATGAATCTGACAAACATGATCATGATCATACTTCTCCTTCCAGATTCCATTTCCGTCTTCCCACTTTTCCCCCGTACAAATCCAGCCTCATCGTA
CGGTCCCTAGATTTCTCTCTCTCTCTCTCTCTCTCTGCCCTCCATCACCGACCTCCTCTTCCCCCACCCCTGTTCATCTTTGGCCCATCCCATCCCCCAATCTTTGATTC
ATTTTTAGGGTTTCCCTTTTTCTAATTATGATTCTTATTGGGCTTCTTCATCATTCGCCTTTCCTCTCTCTCCTTCTTCTTCTCTCTCTTGATCACACCTCCCGCAGCCT
CCTCTTCCAACCCCTTTAGATTCCTGCTGATCCTTTGTGTGTGTGTGTGTGTGTGTATATATAATATCTCCACAATTTGTAAAGGGGTTTTCCTAGGGGTTTGCTTTTAC
TATGTGATGCGGGTTCCTCTCCGCTCTGCCCCCTACTAGTTTCCTTCCAATTTCGTCGAATCTTCCATCTGGGTCTCTGTTTATATTGTCTCCCCAGCGTTGTATTCTTT
TGTCCTTCCTTTTTTGCTTGTGTCTCTTGAATTTTCTCGTTAATAATGGCTTATCAGCATATTCCGGGCCCGAGTTCGATATCTGGATCAAGTACCAGTTCTGGGTTCTT
GAACTCTCCTTTTGGTGATACCACCTACACCAAGGTCTTTGTTGGTGGATTAGCCTGGGAGACTCAGAGCGAAACTATGAGGCGCCACTTTGAGCAGTTTGGAGAGATTC
TTGAGGCTGTTGTCATAACAGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGACTTTCCGTGATCCAGAGTCTGCTAGAAGAGCTTGTGCTGATCCCACTCCA
ATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCCTATGGACGTCTAAGACCGCCTGCACCATATGTTGGAGGCATGCA
GCCCAACAGGGGAACTTTTATTGGAAATTTTGGCTATCAGCAACCGGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTATGCTGCATATGGACCTG
AGTACATCTACCCACAGGGTGGATACAACCCTTTTCTGGGTCAGCAATACCTGCAGATATATGGAATGCCTGGGTCAACGAGCCCTGCTATTTATCATTATGGACAATTA
GGTCAAACGGTCCCTGGTGGTCATGGATATGGAACAGTACATGGATATGCAATGCCGAGTCCTCAGATTGTGCAGTTTAGTGGTCCTAATGTCAATGCGCTAACATCTTC
TCCAGTGCCTACTATTCAAGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTT
CTGACCAAACATCTGGGTGAGGAGTTGATCAGGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCGGATCTAGCCTTGCAAATAATTTATCA
TGCATTCTAGAGGTCATAGTCATGCTCACCAGAGACGTCAGATGGTCTTGAGTCGCTCGAGATGGTGGAGAAGGAACACGGAAGATGCAGGCTGCTCTTCCTCTGAGGAC
CTTTCTTTCCCCATAGTGTTTATAAACTTTTAATACACTACCAAAGCTCTGGATGAGCGGCAGGTAGTCATGGATTGATTGATGCGTGCTTGAATCGGTTTTAAGCATCC
ATTTAGGAATAAAACTGTGTAAAAAGAAGTCAAAATTAGAATCAACATATGATTCTTTTATAGTAAACTCCCAGCATTTTGGGTGTATAGGAAAGTCTCTGGTGCTTTGT
GTGGTCGTGGGTCTATCATCATCTTGATACTAATATATGATTTCATAAGTTCATGTGCATATTAGTGTTAGGATTTATTGTAATCTGAAAGTTCCATAATTTGGATGTCT
TTTGAGGCCTGCCTGTCTTCATAACAACGAAGCAGCTTCAGGTTCTCTATTGGGAAGGATCGAATTGCTGGATTTTATCGGTTTTAGTACCCCTCGATGGCGTGCTGGAT
TGGGATTGGCTGCATCCGAGGATGTACAGTTTTTAGTTCTTCCTTAACAGTATTTGGACAATGGTTAGGTTTCGAAAACATTTTGTTTATTCGTTGTGTTTGTTGTGGGA
ACACTAATTTTTCTTTTCCCCCTCATTATTAGCTTTGTTTTGTTTTCTTTTATTTGGGGGAATGTGTCAAGTGGAAGCAGTAGGATTTTTCAAACCATTATTGTGATATG
ATGCCATGAAAGTACCCATAAAATGACTTCCAAAGTGCAAAGGGAACAAGTTTTGGGATATGACGAGAGCATTGGAATAGAGTCGACTTTTAATTATTCTTTCTGAGTTT
GTTTCTTCCTCCTTGATTATTTTTTAATGGATTCCAAACAAGCATTAGAGACATTGTTATATGGCAAGGAAAGAGGAC
Protein sequenceShow/hide protein sequence
MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG
RPRPPISYGRLRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPFLGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHG
YAMPSPQIVQFSGPNVNALTSSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG