; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1533 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1533
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribosome production factor 1-like
Genome locationMC08:21685487..21692175
RNA-Seq ExpressionMC08g1533
SyntenyMC08g1533
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]1.07e-22194.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]6.36e-237100Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]1.05e-23599.1Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNS+IGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]2.41e-21892.79Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK+LITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]1.25e-22093.69Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEE KN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein1.17e-21892.79Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK+LITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X15.18e-22294.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X15.18e-22294.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like5.11e-23699.1Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNS+IGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like3.08e-237100Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 15.0e-7349.07Show/hide
Query:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNKE+R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   + T PK+LITT   
Subjt:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 17.2e-7248.76Show/hide
Query:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +   LK++K+ +KR   K +   E++AL+  ++ PP+ +P+TIEN R  DET   P+DEE+      DEFS+   R T PKVLITT   
Subjt:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDF+FFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 11.1e-7248.76Show/hide
Query:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R T PK+LITT   
Subjt:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 11.0e-7347.85Show/hide
Query:  SMIKNKEKRKEVHANLKQQKKLEK----RKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLIT
        S IKNK++R+ +   LKQ+K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    + T PK+LIT
Subjt:  SMIKNKEKRKEVHANLKQQKKLEK----RKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLIT

Query:  TCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD++FFR+HRY+F S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 11.1e-7248.76Show/hide
Query:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   + T PK+LITT   
Subjt:  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein3.1e-3839.06Show/hide
Query:  PKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNP
        PK+L+TT R  S+    F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G  
Subjt:  PKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
            P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ D++ FR+H Y                    KGE  P+      L+E GPRF ++
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein6.5e-13772.29Show/hide
Query:  GEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRH
        G EK+N   I+PSMIKNK+KR +V+A  K +KKLEK+K+ +ARDA+EK+ALELGEEPP +MIP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R 
Subjt:  GEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRH

Query:  TLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
          PKVL+TTCRFNS+ GP+ ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPT
Subjt:  TLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKL
        SH+PELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDF+FFRHHRYIF++KE             +K +K  ++ +  RLQECGPRFT+KL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ++LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGCCAACCTCAAGCAGCAGAAGAAGCTTGAGAA
ACGCAAGAGGGCCAAGGCTCGTGATGCCTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTG
ATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTAATAACTACT
TGTCGTTTTAACTCTTCTATTGGACCTTCTTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATCGA
ATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTAGATGGCCTTCTAATCATTGGCTTACCTGAGGGACCTACTGCCCATTTTA
AGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGTCTCCGTGTT
GGAAGATTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTAACGTTTCACAACCAACGGGACTTTGTATTCTTCCGGCATCACCGTTACAT
TTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAATTGCACGGCTTCAGGAATGCG
GTCCTCGCTTCACGATGAAATTGATCAGTTTGCAGCATGGGACCTTTGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACGAGCCGCAGAAGA
TTTTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
GCGCCGCCCTCACCAGTCACGACCCAGCAAACCACTCCCTCTCTCCGTGAACGAACCACGATCAACGCTCTCCACCGGCGCCGCTCCACCTGCGGCCTCCTCGATTCCTT
CAGCTTCTGCGCTCTGGATTGCAAGTTTATGTTAGAGGTTGAACAAAGAGATACAAATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAAC
AAGGAAAAGAGGAAAGAAGTGCACGCCAACCTCAAGCAGCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCCTCTGAAAAGCAAGCTCTTGAACTTGG
AGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCG
ATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTAATAACTACTTGTCGTTTTAACTCTTCTATTGGACCTTCTTTTATATCAGAGTTGCTTTCAGTG
ATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATCGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAG
AAAATTAGATGGCCTTCTAATCATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCA
GCCATGAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGTCTCCGTGTTGGAAGATTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGA
GTTGTAACGTTTCACAACCAACGGGACTTTGTATTCTTCCGGCATCACCGTTACATTTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGA
TGCCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAATTGCACGGCTTCAGGAATGCGGTCCTCGCTTCACGATGAAATTGATCAGTTTGCAGCATGGGACCTTTGATTCTA
AAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACGAGCCGCAGAAGATTTTTCTTGTGACATGCTAAATGGAGTTCTTTACTAACATTTCTGTGGAGTAAA
AGTTGTTCGACTGAAGCTATCTAATATTATGACAGCACGGAAGCGTGGACTTGAGCAGAGGGTTGGAGGTTCGCTCGATTTCGTTGTTCGACAGAATTTGGACAGCCTGT
TGGTCACATTCTTTGAATCCAATTCTCTTCTTGATGGATTCTTTGTCTTGGGTTTCATGTCATGGAAAAACTAGTGGCTTCAGCTGCAGAATCTGCATCAAGTCGTTGAA
AATTAAACGAGTGTTGCTCATACTGCCGGAAGGAATCTCTCCAATTTGGATATAATTTGTTGGGGGATTGTTTAATTTGTACTCTTGTCAATGAGATCACCATTTAGCAA
TCTCTCCAATTTGGTTTCAACATGATGGATGCTTTTGTGAGCAAGATGTCAGTGTAAAACATAGGTTCTTTTGTGGTCGAGGTCAAGGTCGATGTTCTTTCTGGTTGGGT
CACGGTTCGTAGGAGGTAAGAGAGAGAGAGAGAGAAGAGGGAAACAAGAGAGAAATATGATACCTAGATTCGTGGGATTCTTTAGAATTATTTTGTAAAGGTTAGAGATC
AAGTATCACTTTTTAAAACTTAGTGGTTATATAGAAATCTATCTTCAAACTCAGCCATCAAAAGTGTATTTTACCTCAAATTTAAAATCTTGTCAATATGATCAACCAGC
TCAGTGGGTTAATATCTGACCATGAAGTTGAGAGTTTGAATCTCCACTTATAAAAAAAAAAAAATCTTT
Protein sequenceShow/hide protein sequence
MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITT
CRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRV
GRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRR
FFL