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MC08g1575 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1575
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzinc knuckle (CCHC-type) family protein
Genome locationMC08:22961020..22961511
RNA-Seq ExpressionMC08g1575
SyntenyMC08g1575
Gene Ontology termsGO:2000767 - positive regulation of cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0045182 - translation regulator activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585819.1 DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]3.52e-7662.7Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------
        G+KFYC NCGREGHRRHYCPEL G+ +DRRFRCR CG+KGHNRRTCK+S L+ KP++AT+QR C IC  KGH+ RNC KS+                   
Subjt:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------

Query:  -SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
         S+ LI GDRM NE+SR+RQY CRIC + GHNRRNCP+ID K N +T RRTY+CKLC+EK HN+RTCP   MN+LQKNPP A NQ
Subjt:  -SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

KAG7020752.1 DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. argyrosperma]1.35e-7662.16Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------
        G+KFYC NCGREGHRRHYCPEL G+ +DRRFRCR CG+KGHNRRTCK+S L+ KP++AT+QR C IC  KGH+ RN  KS+                   
Subjt:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------

Query:  -SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
         S+ LI GDRM NE+SR+RQY CRIC + GHNRRNCP+ID K N +T RRTY+CKLC+EK HN+RTCP   MN+LQKNPP A NQ
Subjt:  -SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

XP_022151325.1 uncharacterized protein LOC111019288 [Momordica charantia]2.49e-7694.96Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY
        GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACG+KGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY
Subjt:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY

Query:  HCRICNKKGHNRRNCPDID
        HCRICNKKGHNR   P I+
Subjt:  HCRICNKKGHNRRNCPDID

XP_023538286.1 uncharacterized protein LOC111799114 [Cucurbita pepo subsp. pepo]4.46e-7666.67Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD---SMKLINGDRMANENSR
        G+KFYC NCGREGHRRHYCPEL G+ +DRRFRCR CG+KGHNRRTCK+S L+ KP++AT+Q  C IC  KGH+ RNC KS    S+ LI GDRM NE+SR
Subjt:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD---SMKLINGDRMANENSR

Query:  LRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
        +RQY CRIC + GHNRRNCP+ID K N ++ RRTY+CKLC+EK HN+RTCP   MN+L+KNPP + NQ
Subjt:  LRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

XP_038889908.1 uncharacterized protein LOC120079678 isoform X2 [Benincasa hispida]2.29e-7462.37Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------
        GVKFYC NCGREGHRRHYCPEL   + DRRFRCR CG+KGHNRRTC++S LSS P+TAT+QR CGIC  KGHN+RNC KS+                   
Subjt:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD-------------------

Query:  --SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
           + LIN +RM N N R+RQYHCRICNK GH+RRNCP+ D + N  T RR+YTCKLC+EK HN RTCP+R+MN+LQ N PVA NQ
Subjt:  --SMKLINGDRMANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

TrEMBL top hitse value%identityAlignment
A0A0A0KS13 Uncharacterized protein1.28e-7362.86Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR
        GVKFYC NCGREGHRRHYCPEL   ++DRRFRCR CG+KGHNR+TC++S L+  PITAT+QR CGIC +KGHN+RNC KSD+ +          LI+  R
Subjt:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR

Query:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
         +NEN R+RQYHCRIC + GH++RNCP  D + N  + RR+Y+CKLC+EK HN RTCP+R+ N+LQKNPPVA NQ
Subjt:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

A0A1S3CPF7 uncharacterized protein LOC103503314 isoform X22.29e-7163.43Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR
        GVKFYC NCGREGHRRHYCPEL   ++DRRFRCR CG+KGHNRRTC++S+L+  P+  T+QR CGIC +KGHNRRNC KSD  +          LI+  R
Subjt:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR

Query:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
        ++NEN R+RQ HCRIC K GH++  CP ID + N  T RR YTCKLC+EK HN RTCP R+MNDLQKN PVA NQ
Subjt:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

A0A1S3CQW6 uncharacterized protein LOC103503314 isoform X14.34e-7163.43Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR
        GVKFYC NCGREGHRRHYCPEL   ++DRRFRCR CG+KGHNRRTC++S+L+  P+  T+QR CGIC +KGHNRRNC KSD  +          LI+  R
Subjt:  GVKFYCTNCGREGHRRHYCPELI-GNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK----------LINGDR

Query:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
        ++NEN R+RQ HCRIC K GH++  CP ID + N  T RR YTCKLC+EK HN RTCP R+MNDLQKN PVA NQ
Subjt:  MANENSRLRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

A0A6J1DAV1 uncharacterized protein LOC1110192881.21e-7694.96Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY
        GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACG+KGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY
Subjt:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQY

Query:  HCRICNKKGHNRRNCPDID
        HCRICNKKGHNR   P I+
Subjt:  HCRICNKKGHNRRNCPDID

A0A6J1KKD0 uncharacterized protein LOC111496065 isoform X22.82e-7265.48Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD---SMKLINGDRMANENSR
        G+KFYC NCGREGHRRHYCPEL  + +DRRFRCR CG+KGHNRRTCK+S L+SKP++A ++        KGH+RRNC KS    S+ LINGDRM NE+SR
Subjt:  GVKFYCTNCGREGHRRHYCPELIGN-LDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSD---SMKLINGDRMANENSR

Query:  LRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ
        +RQY CRIC + GHNR+NCP+ID K N +T R+TY+CKLC+EK HN+RTCP  NMN+LQKN P A NQ
Subjt:  LRQYHCRICNKKGHNRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20220.1 zinc knuckle (CCHC-type) family protein2.2e-2948.41Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK-LINGDRMANENSRLRQ
        G KFYC NCG+EGHRRHYCPEL  N DR+FRCR CG KGHNRRTC +S        +T    CGIC  +GHN R C K   +    +G+    +      
Subjt:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK-LINGDRMANENSRLRQ

Query:  YHCRICNKKGHNRRNCPDIDGKANDS
        Y C  C K GHN R CP      +DS
Subjt:  YHCRICNKKGHNRRNCPDIDGKANDS

AT5G20220.2 zinc knuckle (CCHC-type) family protein2.2e-2948.41Show/hide
Query:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK-LINGDRMANENSRLRQ
        G KFYC NCG+EGHRRHYCPEL  N DR+FRCR CG KGHNRRTC +S        +T    CGIC  +GHN R C K   +    +G+    +      
Subjt:  GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMK-LINGDRMANENSRLRQ

Query:  YHCRICNKKGHNRRNCPDIDGKANDS
        Y C  C K GHN R CP      +DS
Subjt:  YHCRICNKKGHNRRNCPDIDGKANDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGTAAAATTTTACTGTACAAACTGCGGTCGTGAAGGGCATCGAAGACACTATTGTCCCGAACTTATTGGCAACCTCGATAGGCGATTCAGATGTCGAGCATGTGGAGA
TAAGGGCCATAACAGAAGGACCTGTAAGAGGTCTATATTGAGTAGTAAACCAATCACTGCGACAATGCAGCGTTGTTGTGGGATATGTGATGTAAAGGGCCACAACAGGA
GGAACTGCCCGAAGTCGGATAGCATGAAATTGATCAATGGAGATAGGATGGCTAATGAAAATAGCAGATTGAGGCAGTATCATTGTAGAATCTGCAATAAAAAGGGTCAC
AATCGGCGAAACTGTCCCGATATTGACGGGAAAGCCAACGATTCAACCCCTCGAAGAACATACACCTGCAAACTATGCAATGAAAAATGTCATAATAATAGGACTTGCCC
AAGTAGAAATATGAATGATCTACAGAAAAATCCACCAGTTGCTGCAAACCAA
mRNA sequenceShow/hide mRNA sequence
GGAGTAAAATTTTACTGTACAAACTGCGGTCGTGAAGGGCATCGAAGACACTATTGTCCCGAACTTATTGGCAACCTCGATAGGCGATTCAGATGTCGAGCATGTGGAGA
TAAGGGCCATAACAGAAGGACCTGTAAGAGGTCTATATTGAGTAGTAAACCAATCACTGCGACAATGCAGCGTTGTTGTGGGATATGTGATGTAAAGGGCCACAACAGGA
GGAACTGCCCGAAGTCGGATAGCATGAAATTGATCAATGGAGATAGGATGGCTAATGAAAATAGCAGATTGAGGCAGTATCATTGTAGAATCTGCAATAAAAAGGGTCAC
AATCGGCGAAACTGTCCCGATATTGACGGGAAAGCCAACGATTCAACCCCTCGAAGAACATACACCTGCAAACTATGCAATGAAAAATGTCATAATAATAGGACTTGCCC
AAGTAGAAATATGAATGATCTACAGAAAAATCCACCAGTTGCTGCAAACCAA
Protein sequenceShow/hide protein sequence
GVKFYCTNCGREGHRRHYCPELIGNLDRRFRCRACGDKGHNRRTCKRSILSSKPITATMQRCCGICDVKGHNRRNCPKSDSMKLINGDRMANENSRLRQYHCRICNKKGH
NRRNCPDIDGKANDSTPRRTYTCKLCNEKCHNNRTCPSRNMNDLQKNPPVAANQ