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MC08g1586 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1586
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationMC08:23509018..23509729
RNA-Seq ExpressionMC08g1586
SyntenyMC08g1586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]1.01e-4742.21Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+S+ SK+++  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFLD+P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]5.25e-4943.78Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENI
        CSGFGWN+  KCIE +K V+D+WVK HPNA+ L NK FPYF DL +VFG+DRAT    KTP +M+S      +ED    N E + IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP
        P T +S     G+SR SK+++  SGDL+   ++ MR  +  + KIA W  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++ FLD+P 
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP

Query:  N
        N
Subjt:  N

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]6.56e-4641.71Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+SR SK+++  S DL+    + MR  +  + KI AW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFL++P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]9.83e-4842.21Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+S+ SK+++  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFLD+P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]4.63e-4939.91Show/hide
Query:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIP
        GFGWND+ KCIE +K+V+D+WVK+HPNAK LRNK   Y DL + FGKDRAT A +  P DMAS       ED + + ++ YIP+PP F+     + E++P
Subjt:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIP

Query:  LTLSSRPD-GTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP
         T +S+P  GT +  + +++   + ++V VV++ MRMQT  L+K+A WP K+ E+   +R+ V  +L+ +P +   D + +   L+ +  K  +FL+ P 
Subjt:  LTLSSRPD-GTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP

Query:  NWKYRYWIRLLGR
         +K  + ++LLG+
Subjt:  NWKYRYWIRLLGR

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992484.76e-4842.21Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+S+ SK+++  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFLD+P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

A0A5A7VGQ0 Retrotransposon protein4.91e-4842.21Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+S+ SK+++  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFLD+P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

A0A5D3C7T4 Uncharacterized protein2.54e-4943.78Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENI
        CSGFGWN+  KCIE +K V+D+WVK HPNA+ L NK FPYF DL +VFG+DRAT    KTP +M+S      +ED    N E + IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP
        P T +S     G+SR SK+++  SGDL+   ++ MR  +  + KIA W  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++ FLD+P 
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP

Query:  N
        N
Subjt:  N

A0A5D3CKC1 Retrotransposon protein3.18e-4641.71Show/hide
Query:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI
        CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KTP +M   +     ++D++   E+  IP P   +   GE++
Subjt:  CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKTPSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENI

Query:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP
          T +S     G+SR SK+++  S DL+    + MR  +  + KI AW  ++ E  S+  + + A+L+ +PGM ++DCL+V ++LL D   ++TFL++P
Subjt:  PLTLSSRPDGTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFP

A0A6J1DW73 uncharacterized protein LOC1110250182.24e-4939.91Show/hide
Query:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIP
        GFGWND+ KCIE +K+V+D+WVK+HPNAK LRNK   Y DL + FGKDRAT A +  P DMAS       ED + + ++ YIP+PP F+     + E++P
Subjt:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIP

Query:  LTLSSRPD-GTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP
         T +S+P  GT +  + +++   + ++V VV++ MRMQT  L+K+A WP K+ E+   +R+ V  +L+ +P +   D + +   L+ +  K  +FL+ P 
Subjt:  LTLSSRPD-GTGTSRTSKRKQCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPP

Query:  NWKYRYWIRLLGR
         +K  + ++LLG+
Subjt:  NWKYRYWIRLLGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.3e-0532.63Show/hide
Query:  SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATS--AVMKTPSDMASVPNLG-ADEDLNTQNEEPYIPEPPTFDY
        SGFGW+ E K      +V+ +++K HPN K ++ +S  +F DL I+FG   AT   AV  + S    +  +G   +   T N++  I E   F +
Subjt:  SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATS--AVMKTPSDMASVPNLG-ADEDLNTQNEEPYIPEPPTFDY

AT4G02210.1 unknown protein1.4e-0430.67Show/hide
Query:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLN
        GF W+D  + +     V+DE++K HP+++S R KS P Y DL +V+    +     ++ S+  S   +  D+  N
Subjt:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLN

AT4G02210.2 unknown protein1.4e-0430.67Show/hide
Query:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLN
        GF W+D  + +     V+DE++K HP+++S R KS P Y DL +V+    +     ++ S+  S   +  D+  N
Subjt:  GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLN

AT5G27260.1 unknown protein4.5e-0643.4Show/hide
Query:  SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFD-LAIVFGKDRAT
        SGFGW+   K      +V+ +++K HPN K LR  +F +FD L I+FG+  AT
Subjt:  SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFD-LAIVFGKDRAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCACATGTAGTGGATTCGGTTGGAACGATGAACTTAAATGCATTGAGAAAAAGAAGGATGTGTACGATGAATGGGTCAAGACTCATCCGAATGCCAAGAGTCTTCGAAA
CAAGTCATTCCCTTACTTTGACCTTGCCATTGTATTTGGGAAGGATAGGGCCACAAGTGCAGTCATGAAGACTCCATCTGACATGGCATCTGTTCCAAATCTAGGTGCAG
ACGAGGACCTGAATACGCAGAACGAAGAACCTTACATACCAGAACCCCCAACCTTCGATTACGTTCTCGGGGAAAACATACCATTGACCCTTTCGAGTAGGCCGGATGGC
ACAGGGACGTCAAGAACGAGCAAGAGGAAGCAATGTTAGTCTGGGGACTTGGTTGGAGTAGTCCAATCAGAGATGCGCATGCAAACAATTGTTCTGGACAAGATTGCAGC
TTGGCCAACCAAAAGACATGAAAGGGCCTCAACACAAAGGAGATGAGTGGTCGCAAAACTTGAGTTCGTCCCTGGAATGACATTGGAGGACTGTTTGGTAGTCAGAAAAA
CTTTACTTGCGGACTCCAATAAGGTGAACACATTCCTTGACTTCCCACCAAATTGGAAGTACAGGTATTGGATCCGTCTACTTGGAAGG
mRNA sequenceShow/hide mRNA sequence
ACCACATGTAGTGGATTCGGTTGGAACGATGAACTTAAATGCATTGAGAAAAAGAAGGATGTGTACGATGAATGGGTCAAGACTCATCCGAATGCCAAGAGTCTTCGAAA
CAAGTCATTCCCTTACTTTGACCTTGCCATTGTATTTGGGAAGGATAGGGCCACAAGTGCAGTCATGAAGACTCCATCTGACATGGCATCTGTTCCAAATCTAGGTGCAG
ACGAGGACCTGAATACGCAGAACGAAGAACCTTACATACCAGAACCCCCAACCTTCGATTACGTTCTCGGGGAAAACATACCATTGACCCTTTCGAGTAGGCCGGATGGC
ACAGGGACGTCAAGAACGAGCAAGAGGAAGCAATGTTAGTCTGGGGACTTGGTTGGAGTAGTCCAATCAGAGATGCGCATGCAAACAATTGTTCTGGACAAGATTGCAGC
TTGGCCAACCAAAAGACATGAAAGGGCCTCAACACAAAGGAGATGAGTGGTCGCAAAACTTGAGTTCGTCCCTGGAATGACATTGGAGGACTGTTTGGTAGTCAGAAAAA
CTTTACTTGCGGACTCCAATAAGGTGAACACATTCCTTGACTTCCCACCAAATTGGAAGTACAGGTATTGGATCCGTCTACTTGGAAGG
Protein sequenceShow/hide protein sequence
TTCSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDG
TGTSRTSKRKQCUSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRUVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPPNWKYRYWIRLLGR