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MC08g1641 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1641
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTranscription factor UPBEAT1
Genome locationMC08:24337439..24337678
RNA-Seq ExpressionMC08g1641
SyntenyMC08g1641
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038125.1 basic helix-loop-helix protein [Cucumis melo var. makuwa]4.40e-2766.67Show/hide
Query:  DRVSDGQIARLARRKQ----PKLPRSRSDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        D VSD +IA+   +K+     +L RS S+KR+C KRIR+LRKMIP +ES+ELNGLFRETADY++WLQMKVR+MQALVHVL GSD
Subjt:  DRVSDGQIARLARRKQ----PKLPRSRSDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
KAF9863568.1 hypothetical protein H0E87_014084 [Populus deltoides]2.47e-1366Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +R+R L+K+IPN+ES+ L+GLFRETADY+L LQM+V+VMQ +V VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
KGN58133.1 hypothetical protein Csa_017541 [Cucumis sativus]1.26e-2665.06Show/hide
Query:  DRVSDGQIAR-LARRKQPKLPRSR--SDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        D VSD +IA+ + ++K   + RS   S+KR+C KRIRRL+KM+P +ES+ELNGLFRETADY++WLQMKVR+MQALVHVL GSD
Subjt:  DRVSDGQIAR-LARRKQPKLPRSR--SDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
XP_002301522.1 transcription factor UPBEAT1 [Populus trichocarpa]2.47e-1366Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +R+R L+K+IPN+ES+ L+GLFRETADY+L LQM+V+VMQ +V VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
XP_019427947.1 PREDICTED: transcription factor UPBEAT1-like [Lupinus angustifolius]1.70e-1362Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +++R L+K++PN+ES+EL+GLFRETADY+L LQ +VR+M+ LV+VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
TrEMBL top hitse value%identityAlignment
A0A0A0L8J6 Uncharacterized protein6.10e-2765.06Show/hide
Query:  DRVSDGQIAR-LARRKQPKLPRSR--SDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        D VSD +IA+ + ++K   + RS   S+KR+C KRIRRL+KM+P +ES+ELNGLFRETADY++WLQMKVR+MQALVHVL GSD
Subjt:  DRVSDGQIAR-LARRKQPKLPRSR--SDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
A0A3G0Z5L8 Basic helix-loop-helix protein1.20e-1366Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +R+R L+K+IPN+ES+ L+GLFRETADY+L LQM+V+VMQ +V VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
A0A4V5ZXB7 Uncharacterized protein1.57e-1366Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +R+R L+K+IP++ES+ L+GLFRETADY+L LQM+VRVMQ +V VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
A0A5A7T9M0 Basic helix-loop-helix protein2.13e-2766.67Show/hide
Query:  DRVSDGQIARLARRKQ----PKLPRSRSDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        D VSD +IA+   +K+     +L RS S+KR+C KRIR+LRKMIP +ES+ELNGLFRETADY++WLQMKVR+MQALVHVL GSD
Subjt:  DRVSDGQIARLARRKQ----PKLPRSRSDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
B9GSV5 Uncharacterized protein1.20e-1366Show/hide
Query:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
        +R+R L+K+IPN+ES+ L+GLFRETADY+L LQM+V+VMQ +V VL GSD
Subjt:  KRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD
SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT18.7e-0842.86Show/hide
Query:  IARLARRKQPKLPRSRSDKRVCCKRIRRLRKMIPNTESVE-LNGLFRETADYVLWLQMKVRVMQALVHVL
        + ++  R +  +  SR   R   +R++ L++++PNT++ E L+GLFR+TADY+L L+MKV+VMQ +V VL
Subjt:  IARLARRKQPKLPRSRSDKRVCCKRIRRLRKMIPNTESVE-LNGLFRETADYVLWLQMKVRVMQALVHVL
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators6.2e-0942.86Show/hide
Query:  IARLARRKQPKLPRSRSDKRVCCKRIRRLRKMIPNTESVE-LNGLFRETADYVLWLQMKVRVMQALVHVL
        + ++  R +  +  SR   R   +R++ L++++PNT++ E L+GLFR+TADY+L L+MKV+VMQ +V VL
Subjt:  IARLARRKQPKLPRSRSDKRVCCKRIRRLRKMIPNTESVE-LNGLFRETADYVLWLQMKVRVMQALVHVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCGAGTTTCGGATGGGCAAATCGCAAGATTAGCCCGGAGGAAGCAACCGAAGTTGCCGAGGTCGAGGTCGGACAAGAGGGTTTGTTGTAAGAGGATTAGGAGGCTGAG
GAAGATGATCCCAAATACTGAATCTGTAGAGTTGAATGGGCTTTTTAGAGAGACAGCTGATTATGTTTTGTGGTTGCAAATGAAGGTGAGGGTGATGCAGGCTTTGGTTC
ATGTGCTGAAAGGCTCCGAT
mRNA sequenceShow/hide mRNA sequence
GATCGAGTTTCGGATGGGCAAATCGCAAGATTAGCCCGGAGGAAGCAACCGAAGTTGCCGAGGTCGAGGTCGGACAAGAGGGTTTGTTGTAAGAGGATTAGGAGGCTGAG
GAAGATGATCCCAAATACTGAATCTGTAGAGTTGAATGGGCTTTTTAGAGAGACAGCTGATTATGTTTTGTGGTTGCAAATGAAGGTGAGGGTGATGCAGGCTTTGGTTC
ATGTGCTGAAAGGCTCCGAT
Protein sequenceShow/hide protein sequence
DRVSDGQIARLARRKQPKLPRSRSDKRVCCKRIRRLRKMIPNTESVELNGLFRETADYVLWLQMKVRVMQALVHVLKGSD