; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1754 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1754
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationMC08:25625256..25629775
RNA-Seq ExpressionMC08g1754
SyntenyMC08g1754
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]2.02e-20185.84Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVL-SSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN
        ME+SFT+ PSPSP  L RFDHG+  SS  P+ TP  HSHG N + N  R    S P++   SLSSSS+RRTLSSNWDVL N+SA+SAPSL RFEELDTTN
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVL-SSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR

Query:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
        KAKKNLPSE KIL+NGYQGG+G+DEERG+QQETEEPSPV
Subjt:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]1.58e-19884.96Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNM
        ME+SFT+ PSPSP  L R DHG  SS FP+ TP KHSHGGN + N  R    S P+V   S SSSS+RRTLSSNWDV  N+S +SA SL RFEELDTTNM
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNM

Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH
        LLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK

Query:  AKKNLPSEDKILQNGYQ-GGQGNDEERGTQQETEEPSPV
        AKKNLPSE KIL+NGY+ GGQG+D+ERG QQETEEPSPV
Subjt:  AKKNLPSEDKILQNGYQ-GGQGNDEERGTQQETEEPSPV

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]7.19e-240100Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL
        MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL

Query:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK

Query:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
        KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
Subjt:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV

XP_022948597.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita moschata]9.98e-19985.8Show/hide
Query:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN
        ME+SFTY PSPS   RLM F+HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VKASLSSS +RRTLSSNWDVL N+SA SAP+L RFEELDTTN
Subjt:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR

Query:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP
        KAKKNLPSE KILQNGYQG    DEER  Q ETEEPSP
Subjt:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]1.70e-20686.31Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL
        ME+SFTY PS SP RLMR DHG+ SS FP+  P KHSHGGNS+ N  R   S P+V  S +SSS+RRTLSS+WDVL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL

Query:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAK+YGLIDEVIDDGKPGLIAP A+A  PPKTRVWDLWKVEGSRK K
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK

Query:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
        KNLPSE+KILQNGYQ GQG+DEERG+QQETEE SPV
Subjt:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit7.66e-19984.96Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNM
        ME+SFT+ PSPSP  L R DHG  SS FP+ TP KHSHGGN + N  R    S P+V   S SSSS+RRTLSSNWDV  N+S +SA SL RFEELDTTNM
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNM

Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH
        LLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK

Query:  AKKNLPSEDKILQNGYQ-GGQGNDEERGTQQETEEPSPV
        AKKNLPSE KIL+NGY+ GGQG+D+ERG QQETEEPSPV
Subjt:  AKKNLPSEDKILQNGYQ-GGQGNDEERGTQQETEEPSPV

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit9.78e-20285.84Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVL-SSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN
        ME+SFT+ PSPSP  L RFDHG+  SS  P+ TP  HSHG N + N  R    S P++   SLSSSS+RRTLSSNWDVL N+SA+SAPSL RFEELDTTN
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVL-SSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR

Query:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
        KAKKNLPSE KIL+NGYQGG+G+DEERG+QQETEEPSPV
Subjt:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit3.48e-240100Show/hide
Query:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL
        MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL
Subjt:  MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLL

Query:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAK

Query:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
        KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV
Subjt:  KNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit4.83e-19985.8Show/hide
Query:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN
        ME+SFTY PSPS   RLM F+HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VKASLSSS +RRTLSSNWDVL N+SA SAP+L RFEELDTTN
Subjt:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR

Query:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP
        KAKKNLPSE KILQNGYQG    DEER  Q ETEEPSP
Subjt:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP

A0A6J1KEX5 ATP-dependent Clp protease proteolytic subunit2.66e-19684.62Show/hide
Query:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN
        ME+SFTY  SPS   RLM ++HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VKASLSSS +RRTLSSNWDVL N+SA S P+L RFEELDTTN
Subjt:  MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR

Query:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP
        KAKKNLPSE KILQNGYQG    DEER  Q ETEEPSP
Subjt:  KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 27.3e-5661.63Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AED  KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 13.3e-5663.01Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RIIFLG QVD   A+ I++QLLFLDAED  KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+E+I  DT+RD FM+P EA++YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 37.3e-5661.63Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AED  KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 11.9e-5663.01Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG QVD   A+ I++QLLFLDAED  KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+E+I  DT+RD FM+P EAK+YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic3.8e-11371.48Show/hide
Query:  MRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAP--LVKASLS-SSSMRRTLSSNWDVLENFS----ATSAPSLARFEELDTTNMLLRQRIIFLGS
        +R      S+   L  P K+    N  +   R PK++    V++S+S S   R+TLSSNWDV  +FS    A S   L  FEELDTTNMLLRQRI+FLGS
Subjt:  MRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAP--LVKASLS-SSSMRRTLSSNWDVLENFS----ATSAPSLARFEELDTTNMLLRQRIIFLGS

Query:  QVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKAT
        QVDDMTAD +ISQLL LDAEDS +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGGKAT
Subjt:  QVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKAT

Query:  EMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKI
        EMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI D   PPKT+VWDLWKVEG++K   NLPSE  +
Subjt:  EMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKI

Query:  LQNGY
         QNGY
Subjt:  LQNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 54.2e-5158.19Show/hide
Query:  RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRF
        RF+ +   + L + RII  G  VDD  A+ I++QLL+LDA D TKDI +++NSPGGSVTAGM I+D M+  + DVSTVC+GLAASMGAFLL+AG+KGKR+
Subjt:  RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRF

Query:  CMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
         +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ LE+I  DTDRD FM+  EAKEYGLID VI
Subjt:  CMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

AT1G11750.1 CLP protease proteolytic subunit 66.6e-3642.53Show/hide
Query:  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPN
        LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + IYD M   K  V TV  G+AAS GA LLA G KG R+ MPN
Subjt:  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPN

Query:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
         RVMIHQP    GG   ++  ++ E    + K++++++  TG+PLE+++  T+RD F++  EA E+GLID +++
Subjt:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 32.7e-11471.48Show/hide
Query:  MRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAP--LVKASLS-SSSMRRTLSSNWDVLENFS----ATSAPSLARFEELDTTNMLLRQRIIFLGS
        +R      S+   L  P K+    N  +   R PK++    V++S+S S   R+TLSSNWDV  +FS    A S   L  FEELDTTNMLLRQRI+FLGS
Subjt:  MRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAP--LVKASLS-SSSMRRTLSSNWDVLENFS----ATSAPSLARFEELDTTNMLLRQRIIFLGS

Query:  QVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKAT
        QVDDMTAD +ISQLL LDAEDS +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGGKAT
Subjt:  QVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKAT

Query:  EMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKI
        EMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI D   PPKT+VWDLWKVEG++K   NLPSE  +
Subjt:  EMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKI

Query:  LQNGY
         QNGY
Subjt:  LQNGY

AT5G23140.1 nuclear-encoded CLP protease P72.3e-4145.4Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LL++RII +   ++D T+  +++QLL+L++E+ +K I +++NSPGG VTAG+ IYD M+  ++ +ST+CLG AASM + LLAAG+KG+R  +PN 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD
         VMIHQP G   G+A +++I  +++      LN+++ + TG+PL+ +  + DRD+FM P EAK +G+IDEVID+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P48.5e-5244.23Show/hide
Query:  SSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSS--NWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQ
        SS  P     + +   ++S +    P +  L    L S  +R T  S   +       + +  S  R  E D   +LLR+RI+FLGS +DD  AD I+SQ
Subjt:  SSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSS--NWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQ

Query:  LLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK
        LL LDA+D  KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS  + +L AG+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K
Subjt:  LLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK

Query:  IKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAP
          +  I +  T +  EQ+  D DRD +M+P EA EYGLID VID      + P+ D   P
Subjt:  IKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAGTTTCACATACACGCCTTCTCCTTCGCCTCAGAGGCTCATGCGCTTCGACCATGGAGTTCTAAGTTCTCAGTTTCCACTTTTCACTCCTCGGAAGCACTC
CCATGGCGGCAATTCCAGTTTAAATGGTCTTAGGACCCCAAAATCGGCTCCTCTAGTGAAGGCCTCGCTCAGTTCTTCGTCGATGAGGCGGACCTTATCAAGTAATTGGG
ACGTTTTGGAGAATTTTTCTGCAACTTCCGCTCCATCGCTGGCTAGGTTCGAAGAGCTCGACACTACCAACATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAG
GTTGATGACATGACAGCAGATTTCATCATAAGCCAGCTACTGTTTCTTGATGCTGAAGACTCAACAAAAGACATCAAATTGTTTATCAACTCACCTGGTGGCTCTGTCAC
TGCTGGAATGGGAATATACGATGCAATGAAGTTGTGCAAGGCCGACGTTTCAACAGTTTGTCTAGGACTCGCTGCATCTATGGGAGCATTTCTTCTAGCTGCTGGTTCAA
AGGGAAAGCGATTCTGCATGCCCAATGGGAGAGTGATGATCCATCAACCTCTCGGAACAGCTGGAGGGAAGGCAACAGAGATGAGTATACGGATACGAGAAATGGCGTAT
CACAAGATCAAGCTGAACAAAATTTTTTCAAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACGGACCGAGATAATTTCATGAATCCCTGGGAAGCTAAGGA
ATATGGTTTGATTGATGAAGTTATTGATGATGGGAAGCCAGGACTCATTGCTCCAATTGCAGATGCAGCTGCTCCGCCAAAAACCCGAGTCTGGGATCTATGGAAGGTGG
AAGGGAGTAGGAAAGCCAAGAAGAATCTGCCTTCAGAAGACAAGATCTTGCAGAATGGATATCAAGGGGGTCAAGGAAACGACGAGGAGCGCGGTACCCAACAAGAAACA
GAAGAACCGAGTCCTGTATGA
mRNA sequenceShow/hide mRNA sequence
GCAGATTTTAGGAAGAAAACTCTTTATTTTTATTTTTGGTAGAGACGAAATTCCGCCACCCCAATCTTGGATTTCTTCTCTTCATCGCAGAGAAGAGGGAAAATGGAGAT
GAGTTTCACATACACGCCTTCTCCTTCGCCTCAGAGGCTCATGCGCTTCGACCATGGAGTTCTAAGTTCTCAGTTTCCACTTTTCACTCCTCGGAAGCACTCCCATGGCG
GCAATTCCAGTTTAAATGGTCTTAGGACCCCAAAATCGGCTCCTCTAGTGAAGGCCTCGCTCAGTTCTTCGTCGATGAGGCGGACCTTATCAAGTAATTGGGACGTTTTG
GAGAATTTTTCTGCAACTTCCGCTCCATCGCTGGCTAGGTTCGAAGAGCTCGACACTACCAACATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGA
CATGACAGCAGATTTCATCATAAGCCAGCTACTGTTTCTTGATGCTGAAGACTCAACAAAAGACATCAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAA
TGGGAATATACGATGCAATGAAGTTGTGCAAGGCCGACGTTTCAACAGTTTGTCTAGGACTCGCTGCATCTATGGGAGCATTTCTTCTAGCTGCTGGTTCAAAGGGAAAG
CGATTCTGCATGCCCAATGGGAGAGTGATGATCCATCAACCTCTCGGAACAGCTGGAGGGAAGGCAACAGAGATGAGTATACGGATACGAGAAATGGCGTATCACAAGAT
CAAGCTGAACAAAATTTTTTCAAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACGGACCGAGATAATTTCATGAATCCCTGGGAAGCTAAGGAATATGGTT
TGATTGATGAAGTTATTGATGATGGGAAGCCAGGACTCATTGCTCCAATTGCAGATGCAGCTGCTCCGCCAAAAACCCGAGTCTGGGATCTATGGAAGGTGGAAGGGAGT
AGGAAAGCCAAGAAGAATCTGCCTTCAGAAGACAAGATCTTGCAGAATGGATATCAAGGGGGTCAAGGAAACGACGAGGAGCGCGGTACCCAACAAGAAACAGAAGAACC
GAGTCCTGTATGACACGAGACCCACGTGGTTCTTCTTCCTCTTCCTCAGCTTCCGTTGTTGTATCCTAATTTGTTGTTTCCATTCTCAAATAGCTCTCTCTCTAGTCTCT
GTAAGATCTTAAAGGTGATTTTTACCAATCAGTTAAACCAGTATAGGTTTTGGCAAATCCAGAGGCCGCAATTGTACGTTCACATTTCACCAATCTCTTCTCGTAAAACC
ATTGTGCAGAAGCTAAATAATGCTCGAGTCAATATCTGAATATGTGTCGAAACCTCAGCACGATGAGAACAGCGAGATGTAGTCTGGAAGGCGACACTCGTGATTTTGAG
GTAGCAGGAATTTCTACGAGATGAAAATGCAGAGAATGGCAGGATTTCAAAGGACTCATTCCGTATCGATTTCCTTGGTAGATCAAACCAATTGTCTACACTAAATGGCC
ACTGGTTTCCAAGGCTACTGCAGCATAACGCAGATGGCAGGCTACACATTATTTTAATTTTTTCTAAAAATGAACTATTCAATGTTGGTCGGTTTTTCGAACAACCAAGT
TTGATCGACCATTGATGTCAGTTCAGTCAATTTGGTCGGTTAGATAAGTTTTTTGAAGTTTTTTGCTCACTCCTAAAGTTAAGGCATGTACCCGACCAAAAAATAGTGAG
TTTGAATTCCTA
Protein sequenceShow/hide protein sequence
MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPLVKASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQ
VDDMTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAY
HKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKILQNGYQGGQGNDEERGTQQET
EEPSPV