; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1773 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1773
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationMC08:25799480..25799900
RNA-Seq ExpressionMC08g1773
SyntenyMC08g1773
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]3.33e-4456.64Show/hide
Query:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY-------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDN
        LLS S L L +LL  + TS  +S+  +NPD EIKCGSCPCS PCIQ+ SPPP        C P +S  PPPPRFIYT   P   +PPPPRF YTTGVP N
Subjt:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY-------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDN

Query:  VYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        +Y+ D N+ WYYFSG T  +P + A +V  GCGAL LM F KW
Subjt:  VYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

KAG6581215.1 hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia]3.28e-4860.14Show/hide
Query:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD
        SL  LF+ L  AD+ P+  V L++P+ EIKCGSCPCS PC+++        PPP C PAL PPPPPPRFIYT+  P    PPPPRFIYTTGVP N+YQ D
Subjt:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD

Query:  VNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
         N++WYYFSG T  +PA  A +V  GCGAL+LMAFGKW
Subjt:  VNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

KAG7017949.1 hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma]1.21e-4760.74Show/hide
Query:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR----SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNS
        SL  LF+ L  AD+ P+  V  ++P+ EIKCGSCPCS PC+++     PPP C PAL PPPPPPRFIYT+  P    PPPPRFIYTTGVP N+YQ D N+
Subjt:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR----SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNS

Query:  QWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        +WYYFSG T  +PA  A +V  GCGAL+LMAFGKW
Subjt:  QWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

XP_022984145.1 probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]9.99e-4558.39Show/hide
Query:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDV
        SL  LF+ L  A++ P+  V  ++P+ EIKCGSCPCS PC+++       PPP C PAL PPPPPPRFIYT+  P    PPPPRFIYTTGVP N+YQ D 
Subjt:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDV

Query:  NSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        N++WYYFSG T    A  A +V  GCGAL+LMAFGKW
Subjt:  NSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]2.33e-4658.7Show/hide
Query:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD
        SL  LF+ L  AD+ P   V  ++P+ EIKCGSCPCS PC+++        PPP C PAL PPPPPPRFIYT   P    PPPPRFIYTTGVP N+YQ D
Subjt:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD

Query:  VNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
         N++WYYFSG T  +PA    +V  GCGAL+LMAFGKW
Subjt:  VNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein5.06e-4254.79Show/hide
Query:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY----------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGV
        LLS S L   +LL ++ TS  + V  +NPD EIKCGSCPCS PCIQ+ SPPP           C P +S  PPPPRFIYTT  P   +PPPPRF YTTGV
Subjt:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY----------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGV

Query:  PDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        P N+Y+ D N+ WYYFSG    +P + A  V  GCGAL LM F KW
Subjt:  PDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

A0A2C9WJS4 Uncharacterized protein1.97e-2049.04Show/hide
Query:  ENPDVEIKCGSCPCSKPCIQRSPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGA
        + PD  IKCGSCPC  PC    PPP       PPPPPP   Y   +P    PPPPR IY T VP N+Y  D    W Y+ G    K  VT  L++AGCGA
Subjt:  ENPDVEIKCGSCPCSKPCIQRSPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGA

Query:  LDLM
        L LM
Subjt:  LDLM

A0A5A7V4T2 Formin-like protein 31.61e-4456.64Show/hide
Query:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY-------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDN
        LLS S L L +LL  + TS  +S+  +NPD EIKCGSCPCS PCIQ+ SPPP        C P +S  PPPPRFIYT   P   +PPPPRF YTTGVP N
Subjt:  LLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR-SPPPY-------CNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDN

Query:  VYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        +Y+ D N+ WYYFSG T  +P + A +V  GCGAL LM F KW
Subjt:  VYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

A0A6J1GAW3 leucine-rich repeat extensin-like protein 21.53e-2953.28Show/hide
Query:  SSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCP-CSKPCIQRSPPPYCNPALSPPP-PPPRFIYTTGVPGHLSPPPP-RFIYTTGVPDNVYQTDVNS
        S+ + L +LL+   TSP +S    +PD EI C S   CS P +Q+  P   +P L PPP PPPRF YTT      SPPPP RFIYTTGVP ++YQ D  +
Subjt:  SSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCP-CSKPCIQRSPPPYCNPALSPPP-PPPRFIYTTGVPGHLSPPPP-RFIYTTGVPDNVYQTDVNS

Query:  QWYYFSGGTSPKPAVTAALVVAG--CGALDLMAFGKW
        +WYYFSG     PA+ AALVV G  CGALDL+ FGKW
Subjt:  QWYYFSGGTSPKPAVTAALVVAG--CGALDLMAFGKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028614.84e-4558.39Show/hide
Query:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDV
        SL  LF+ L  A++ P+  V  ++P+ EIKCGSCPCS PC+++       PPP C PAL PPPPPPRFIYT+  P    PPPPRFIYTTGVP N+YQ D 
Subjt:  SLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQR------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDV

Query:  NSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW
        N++WYYFSG T    A  A +V  GCGAL+LMAFGKW
Subjt:  NSQWYYFSGGTSPKPAVTAALVVAGCGALDLMAFGKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23040.1 hydroxyproline-rich glycoprotein family protein8.0e-0439.71Show/hide
Query:  CSKPCIQR----------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD
        CS  CIQ            PPP C P  + PPPPP+ + +   P    PPP  F+Y TG P N+Y  D
Subjt:  CSKPCIQR----------SPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTD

AT3G03350.1 NAD(P)-binding Rossmann-fold superfamily protein3.2e-0547.83Show/hide
Query:  PPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFS
        PPPPR  Y +      SPPPP+++Y TGVP  +Y+T+ + QW Y S
Subjt:  PPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFS

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein6.5e-0636.76Show/hide
Query:  PPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALD
        PPPPR  Y +      SPPPP+++Y TGVP  +Y+T+ + QW Y S            +V+ G G ++
Subjt:  PPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFSGGTSPKPAVTAALVVAGCGALD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCTCCTCTTCTCTCCTCTTCTCTTCTCCTCCTCTTCATTCTCCTCACCGACGCCGATACCTCACCGTTGGTATCGGTCGGTTTGGAGAATCCCGATGTCGAAAT
CAAATGTGGATCCTGCCCTTGTTCCAAGCCATGCATTCAGCGGTCGCCGCCGCCGTATTGCAACCCAGCGCTGTCACCCCCGCCACCGCCCCCGAGGTTCATTTATACGA
CAGGTGTTCCCGGTCACTTGTCACCGCCGCCACCGAGGTTCATTTATACGACCGGCGTCCCCGATAACGTGTACCAAACCGATGTGAACAGCCAATGGTATTATTTCTCC
GGTGGAACGTCGCCGAAGCCAGCGGTCACGGCGGCACTGGTGGTGGCGGGCTGTGGAGCTTTGGATCTCATGGCGTTTGGTAAGTGG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCTCCTCTTCTCTCCTCTTCTCTTCTCCTCCTCTTCATTCTCCTCACCGACGCCGATACCTCACCGTTGGTATCGGTCGGTTTGGAGAATCCCGATGTCGAAAT
CAAATGTGGATCCTGCCCTTGTTCCAAGCCATGCATTCAGCGGTCGCCGCCGCCGTATTGCAACCCAGCGCTGTCACCCCCGCCACCGCCCCCGAGGTTCATTTATACGA
CAGGTGTTCCCGGTCACTTGTCACCGCCGCCACCGAGGTTCATTTATACGACCGGCGTCCCCGATAACGTGTACCAAACCGATGTGAACAGCCAATGGTATTATTTCTCC
GGTGGAACGTCGCCGAAGCCAGCGGTCACGGCGGCACTGGTGGTGGCGGGCTGTGGAGCTTTGGATCTCATGGCGTTTGGTAAGTGG
Protein sequenceShow/hide protein sequence
MAPPLLSSSLLLLFILLTDADTSPLVSVGLENPDVEIKCGSCPCSKPCIQRSPPPYCNPALSPPPPPPRFIYTTGVPGHLSPPPPRFIYTTGVPDNVYQTDVNSQWYYFS
GGTSPKPAVTAALVVAGCGALDLMAFGKW