; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1804 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1804
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTHO complex subunit 4D-like
Genome locationMC08:26191073..26192449
RNA-Seq ExpressionMC08g1804
SyntenyMC08g1804
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK01611.1 THO complex subunit 4D [Cucumis melo var. makuwa]3.02e-9577.94Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSI---SFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRM
        M TP+D+S E VIKKNNR+KLRAR RAR GRGAGGSFNGGR VVIGSVR   L INAR SA SI   SFKLS  + +LF GESHCGS S  N  LPP RM
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSI---SFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRM

Query:  KNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI
        KNVQWQHDL EDSLRASGISGI+IGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE+
Subjt:  KNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI

Query:  IGNN
        +G+N
Subjt:  IGNN

XP_022143315.1 THO complex subunit 4D-like [Momordica charantia]7.67e-11588.89Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ
        MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIF                     PPRRMKNVQWQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ

Query:  HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI+GNN
Subjt:  HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

XP_022143379.1 THO complex subunit 4D-like [Momordica charantia]1.85e-8672.5Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ
        MATP+D+S E +IKKNNR+KLRAR RAR GRGAGGSFNGGRVVIGS+R   L+IN RPSA SIS                           PPRRMKNVQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ

Query:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        WQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIEI+G+N
Subjt:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

XP_022935328.1 THO complex subunit 4D-like [Cucurbita moschata]1.36e-8472.64Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV
        MATP+D+S E VIKKNNR+KLRAR RAR GRGAGGS+NGGR VVIGSVR   L INARPSA SIS                           PPRRMKNV
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV

Query:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN
        QWQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE++G+
Subjt:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN

Query:  N
        N
Subjt:  N

XP_023527122.1 THO complex subunit 4D [Cucurbita pepo subsp. pepo]1.36e-8472.64Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV
        MATP+D+S E VIKKNNR+KLRAR RAR GRGAGGS+NGGR VVIGSVR   L INARPSA SIS                           PPRRMKNV
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV

Query:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN
        QWQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE++G+
Subjt:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A5D3BPA9 THO complex subunit 4D1.46e-9577.94Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSI---SFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRM
        M TP+D+S E VIKKNNR+KLRAR RAR GRGAGGSFNGGR VVIGSVR   L INAR SA SI   SFKLS  + +LF GESHCGS S  N  LPP RM
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSI---SFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRM

Query:  KNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI
        KNVQWQHDL EDSLRASGISGI+IGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE+
Subjt:  KNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI

Query:  IGNN
        +G+N
Subjt:  IGNN

A0A6J1CNH0 THO complex subunit 4D-like3.72e-11588.89Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ
        MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIF                     PPRRMKNVQWQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ

Query:  HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI+GNN
Subjt:  HDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

A0A6J1CP51 THO complex subunit 4D-like8.98e-8772.5Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ
        MATP+D+S E +IKKNNR+KLRAR RAR GRGAGGSFNGGRVVIGS+R   L+IN RPSA SIS                           PPRRMKNVQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ

Query:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        WQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIEI+G+N
Subjt:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

A0A6J1FAB9 THO complex subunit 4D-like6.58e-8572.64Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV
        MATP+D+S E VIKKNNR+KLRAR RAR GRGAGGS+NGGR VVIGSVR   L INARPSA SIS                           PPRRMKNV
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV

Query:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN
        QWQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE++G+
Subjt:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN

Query:  N
        N
Subjt:  N

A0A6J1J564 THO complex subunit 4D-like9.06e-8572.64Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV
        MATP+D+S E VIKKNNR+KLRAR RAR GRGAGGS+NGGR VVIGSVR   L INARPSA SIS                           PPRRMKNV
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGR-VVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNV

Query:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN
        QWQHDL EDSLRASGISGIEIGTKLYVS+L++GVTKEDI ELFS +GDLKRFAIHYDKNGRP G AEVVYTRRSDAFAA KRYNNVLLDGKP+KIE++G+
Subjt:  QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGN

Query:  N
        N
Subjt:  N

SwissProt top hitse value%identityAlignment
B5FXN8 THO complex subunit 42.1e-2637.68Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGS----------FNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP
        MA  +D+S + +IK  NR +  A R  R GRG GG+            GGR   G VRN  + AR                             RNR  P
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGS----------FNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP

Query:  PRRMKNV--QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK
          R K +  +WQHDL +    A   +G+E G KL VS+L+FGV+  DI ELF+  G LK+ A+HYD++GR  G A+V + R++DA  A K+YN V LDG+
Subjt:  PRRMKNV--QWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK

Query:  PLKIEII
        P+ I+++
Subjt:  PLKIEII

Q6NQ72 THO complex subunit 4D3.1e-3844.5Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ
        M+  ++++ + ++K+    +   R  +R  GRG GG   GGR    + R  L +NARPS+ +I                          + P RR++++ 
Subjt:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ

Query:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        WQ  L ED LRA+G SG+E+GT+L+V++L+ GVT EDI ELFS +G+++R+AIHYDKNGRP G AEVVY RRSDAF A K+YNNVLLDG+P+++EI+G N
Subjt:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

Q8L719 THO complex subunit 4B2.0e-2941.9Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ
        M+  +D+S + +I K+NRK   +R R   G   GG+  GGR   GS      N+ PS     F   +  +   Y           +R +  ++  +  WQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ

Query:  HDLL--EDSLRAS----------GISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK
        +D+   + S+ A+          G S IE GTKLY+S+L++GV+ EDI ELFS VGDLKR+ IHYD++GR  G AEVV++RR DA AA KRYNNV LDGK
Subjt:  HDLL--EDSLRAS----------GISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK

Query:  PLKIEIIGNN
         +KIEI+G N
Subjt:  PLKIEIIGNN

Q8L773 THO complex subunit 4A7.6e-2956.73Show/hide
Query:  WQHDLL----EDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI
        W HD+     ED       +GIE GTKLY+S+L++GV  EDI ELF+ VG+LKR+ +H+D++GR  G AEVVY+RR DA AA K+YN+V LDGKP+KIEI
Subjt:  WQHDLL----EDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEI

Query:  IGNN
        +G N
Subjt:  IGNN

Q94EH8 THO complex subunit 4C9.9e-3743.75Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP
        M+  ++++ + ++KK+  ++  A R        + GRG GG     GG    G VR   L +N RPS+   SF ++               L+ R R LP
Subjt:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP

Query:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL
               Q Q+DL E++LRA G+SG+E+GT +Y+++L+ GVT EDI EL++ +G+LKR+AIHYDKNGRP G AEVVY RRSDA  A ++YNNVLLDG+P+
Subjt:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL

Query:  KIEIIGNN
        K+EI+G N
Subjt:  KIEIIGNN

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.0e-3843.75Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP
        M+  ++++ + ++KK+  ++  A R        + GRG GG     GG    G VR   L +N RPS+   SF ++               L+ R R LP
Subjt:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP

Query:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL
               Q Q+DL E++LRA G+SG+E+GT +Y+++L+ GVT EDI EL++ +G+LKR+AIHYDKNGRP G AEVVY RRSDA  A ++YNNVLLDG+P+
Subjt:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL

Query:  KIEIIGNN
        K+EI+G N
Subjt:  KIEIIGNN

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.0e-3843.75Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP
        M+  ++++ + ++KK+  ++  A R        + GRG GG     GG    G VR   L +N RPS+   SF ++               L+ R R LP
Subjt:  MATPVDISREAVIKKNNRKKLRARRRA------RCGRGAGG--SFNGGRVVIGSVRN--LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLP

Query:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL
               Q Q+DL E++LRA G+SG+E+GT +Y+++L+ GVT EDI EL++ +G+LKR+AIHYDKNGRP G AEVVY RRSDA  A ++YNNVLLDG+P+
Subjt:  PRRMKNVQWQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPL

Query:  KIEIIGNN
        K+EI+G N
Subjt:  KIEIIGNN

AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-3041.9Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ
        M+  +D+S + +I K+NRK   +R R   G   GG+  GGR   GS      N+ PS     F   +  +   Y           +R +  ++  +  WQ
Subjt:  MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQ

Query:  HDLL--EDSLRAS----------GISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK
        +D+   + S+ A+          G S IE GTKLY+S+L++GV+ EDI ELFS VGDLKR+ IHYD++GR  G AEVV++RR DA AA KRYNNV LDGK
Subjt:  HDLL--EDSLRAS----------GISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGK

Query:  PLKIEIIGNN
         +KIEI+G N
Subjt:  PLKIEIIGNN

AT5G37720.1 ALWAYS EARLY 42.2e-3944.5Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ
        M+  ++++ + ++K+    +   R  +R  GRG GG   GGR    + R  L +NARPS+ +I                          + P RR++++ 
Subjt:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ

Query:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        WQ  L ED LRA+G SG+E+GT+L+V++L+ GVT EDI ELFS +G+++R+AIHYDKNGRP G AEVVY RRSDAF A K+YNNVLLDG+P+++EI+G N
Subjt:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN

AT5G37720.2 ALWAYS EARLY 42.2e-3944.5Show/hide
Query:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ
        M+  ++++ + ++K+    +   R  +R  GRG GG   GGR    + R  L +NARPS+ +I                          + P RR++++ 
Subjt:  MATPVDISREAVIKKNNRKKLRARRRAR-CGRGAGGSFNGGRVVIGSVRN-LNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQ

Query:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN
        WQ  L ED LRA+G SG+E+GT+L+V++L+ GVT EDI ELFS +G+++R+AIHYDKNGRP G AEVVY RRSDAF A K+YNNVLLDG+P+++EI+G N
Subjt:  WQHDLLEDSLRASGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGCCTGTGGATATCTCACGAGAGGCTGTGATAAAGAAGAATAACCGTAAGAAGCTCAGAGCACGACGTAGGGCCCGTTGTGGGCGTGGAGCAGGTGGGTCTTT
TAATGGTGGAAGAGTAGTGATAGGGTCGGTTCGTAATCTCAACATAAATGCACGACCATCTGCTTGCTCAATTAGCTTTAAACTGTCGATATTTATAAAATTGTTGTTCT
ATGGAGAATCTCATTGCGGCTCACTCTCTTGTCGGAATCGTCATCTGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTACTTGAAGACAGTCTTAGAGCT
TCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCGACTTGAATTTTGGGGTGACCAAAGAAGACATAATGGAGTTGTTCTCTGCTGTTGGAGACCTGAA
AAGATTTGCAATTCATTATGACAAAAATGGCCGTCCATGTGGCTTGGCAGAGGTGGTATATACTCGTAGAAGTGATGCATTTGCTGCTCAGAAGCGCTATAACAATGTGT
TACTGGATGGGAAGCCATTGAAGATTGAAATTATTGGTAACAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTACGCCTGTGGATATCTCACGAGAGGCTGTGATAAAGAAGAATAACCGTAAGAAGCTCAGAGCACGACGTAGGGCCCGTTGTGGGCGTGGAGCAGGTGGGTCTTT
TAATGGTGGAAGAGTAGTGATAGGGTCGGTTCGTAATCTCAACATAAATGCACGACCATCTGCTTGCTCAATTAGCTTTAAACTGTCGATATTTATAAAATTGTTGTTCT
ATGGAGAATCTCATTGCGGCTCACTCTCTTGTCGGAATCGTCATCTGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTACTTGAAGACAGTCTTAGAGCT
TCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCGACTTGAATTTTGGGGTGACCAAAGAAGACATAATGGAGTTGTTCTCTGCTGTTGGAGACCTGAA
AAGATTTGCAATTCATTATGACAAAAATGGCCGTCCATGTGGCTTGGCAGAGGTGGTATATACTCGTAGAAGTGATGCATTTGCTGCTCAGAAGCGCTATAACAATGTGT
TACTGGATGGGAAGCCATTGAAGATTGAAATTATTGGTAACAAC
Protein sequenceShow/hide protein sequence
MATPVDISREAVIKKNNRKKLRARRRARCGRGAGGSFNGGRVVIGSVRNLNINARPSACSISFKLSIFIKLLFYGESHCGSLSCRNRHLPPRRMKNVQWQHDLLEDSLRA
SGISGIEIGTKLYVSDLNFGVTKEDIMELFSAVGDLKRFAIHYDKNGRPCGLAEVVYTRRSDAFAAQKRYNNVLLDGKPLKIEIIGNN