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MC08g1870 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1870
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCCHC-type domain-containing protein
Genome locationMC08:26962010..26962165
RNA-Seq ExpressionMC08g1870
SyntenyMC08g1870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1001712.1 hypothetical protein AG4045_009864 [Apium graveolens]6.88e-0664.86Show/hide
Query:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        R+   V  HSNYVR SF F RSREIL+VL PRFH  G
Subjt:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

KAF3949771.1 hypothetical protein CMV_024397 [Castanea mollissima]1.16e-0872.34Show/hide
Query:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSRE
        +ALAISYGSSSSQPQ         LSGQV  HSNYVRRSFAF RSRE
Subjt:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSRE

KAF3949772.1 hypothetical protein CMV_024397 [Castanea mollissima]2.12e-0872.34Show/hide
Query:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSRE
        +ALAISYGSSSSQPQ         LSGQV  HSNYVRRSFAF RSRE
Subjt:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSRE

KAG8369217.1 hypothetical protein BUALT_Bualt15G0128300 [Buddleja alternifolia]1.25e-0967.92Show/hide
Query:  ALAISYGSSSSQPQ----RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHR
        ALAISYGSSSSQPQ    R    +  HSNYVR SFAF RSREIL+VL PRF++
Subjt:  ALAISYGSSSSQPQ----RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHR

PRQ15628.1 hypothetical protein RchiOBHm_MTg0498641 [Rosa chinensis]1.39e-1066.67Show/hide
Query:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        +ALAISYGSSSSQP+         LSGQV PHSN    SF F RSREILRVL PRFHR G
Subjt:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

TrEMBL top hitse value%identityAlignment
A0A2N9EGN9 CCHC-type domain-containing protein2.58e-1775.86Show/hide
Query:  LAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        LA+SYGSSSSQPQ         LSGQV PHSNYVRRSFAF RSREILRVL PRFHR G
Subjt:  LAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

A0A2N9FMS5 CCHC-type domain-containing protein1.15e-1775.86Show/hide
Query:  LAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        LA+SYGSSSSQPQ         LSGQV PHSNYVRRSFAF RSREILRVL PRFHR G
Subjt:  LAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

A0A2P6P124 Uncharacterized protein6.71e-1166.67Show/hide
Query:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        +ALAISYGSSSSQP+         LSGQV PHSN    SF F RSREILRVL PRFHR G
Subjt:  MALAISYGSSSSQPQR--------LSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

A0A494G8S0 Uncharacterized protein1.42e-0770.27Show/hide
Query:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        R+   V  HSNYVR SFAF RSREIL+VL PRFHR G
Subjt:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

A0A6L5BAS1 Uncharacterized protein3.33e-0664.86Show/hide
Query:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG
        R+   V  HSNYVR SF F RSREIL+VL PRFH  G
Subjt:  RLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGAGGCTCAGTGGTCAGGTCTGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGTCAGATC
TAGAGAGATACTACGAGTCCTCTGTCCCAGATTCCATCGCTGCGGC
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGAGGCTCAGTGGTCAGGTCTGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGTCAGATC
TAGAGAGATACTACGAGTCCTCTGTCCCAGATTCCATCGCTGCGGC
Protein sequenceShow/hide protein sequence
MALAISYGSSSSQPQRLSGQVCPHSNYVRRSFAFVRSREILRVLCPRFHRCG