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MC08g1945 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1945
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationMC08:27618242..27618409
RNA-Seq ExpressionMC08g1945
SyntenyMC08g1945
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.42e-0439.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.93e-0439.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.94e-0441.3Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWN
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWN

KAA0056004.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.45e-0541.18Show/hide
Query:  RVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        R+QKR+ N+ LSP  + MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  RVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.92e-0439.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein6.89e-0539.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein9.41e-0541.3Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWN
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWN

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein9.33e-0539.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

A0A5A7ULE1 LINE-1 retrotransposable element ORF2 protein2.64e-0541.18Show/hide
Query:  RVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        R+QKR+ N+ LSP  + MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  RVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein9.31e-0539.29Show/hide
Query:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW
        I+   R+QKR+ N+ LSP    MC K  + I+H FIHC ++ ++W+ A  K ++ W
Subjt:  IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGATATCCTAGCTAGGGTGCAAAAGAGAATTACGAATTTTAACCTATCTCCTCAAATGTTTATTATGTGTGGCAAAGATGTGAAGTCGATCTCTCATCATTTCATCCA
TTGTAGTTTTGCCTCTAAAGTTTGGAACTTCGCCGGCAATAAGTTTGTGATGGCCTGG
mRNA sequenceShow/hide mRNA sequence
ATTGATATCCTAGCTAGGGTGCAAAAGAGAATTACGAATTTTAACCTATCTCCTCAAATGTTTATTATGTGTGGCAAAGATGTGAAGTCGATCTCTCATCATTTCATCCA
TTGTAGTTTTGCCTCTAAAGTTTGGAACTTCGCCGGCAATAAGTTTGTGATGGCCTGG
Protein sequenceShow/hide protein sequence
IDILARVQKRITNFNLSPQMFIMCGKDVKSISHHFIHCSFASKVWNFAGNKFVMAW