CuGenDBv2

Gene ID	MC08g2064
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	mRNA cap-binding protein
Genome location	MC08:29306077..29306372
RNA-Seq Expression	MC08g2064
Synteny	MC08g2064
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR001040 - Translation Initiation factor eIF- 4e IPR023398 - Translation Initiation factor eIF- 4e-like

Homology

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GenBank top hits

e value

%identity

Alignment

MBA0573572.1 hypothetical protein [Gossypium lobatum]

9.30e-35

57.26

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR S+LP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD++   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

XP_012070439.1 eukaryotic translation initiation factor NCBP [Jatropha curcas]

1.53e-34

58.97

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

XP_020220758.1 eukaryotic translation initiation factor NCBP isoform X2 [Cajanus cajan]

9.37e-35

58.97

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

XP_021686063.1 eukaryotic translation initiation factor NCBP-like [Hevea brasiliensis]

1.69e-34

58.97

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR+SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

XP_038904121.1 eukaryotic translation initiation factor NCBP isoform X3 [Benincasa hispida]

1.49e-34

59.83

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL+FGD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

TrEMBL top hits

e value

%identity

Alignment

A0A067KXK5 mRNA cap-binding protein

7.39e-35

58.97

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

A0A0R0FR50 mRNA cap-binding protein

9.23e-35

58.12

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR +SLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

A0A151T4X4 mRNA cap-binding protein

1.39e-34

58.97

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

A0A5A7UUL0 mRNA cap-binding protein

1.50e-34

59.83

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL+FGD+I   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

A0A7J8N9R0 mRNA cap-binding protein (Fragment)

4.51e-35

57.26

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR S+LP PTDLHLFKE I PL        GG        ++  ++W+ L LALVGDQL++GD++   VL IRFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

SwissProt top hits

e value

%identity

Alignment

A3RCV9 Eukaryotic translation initiation factor NCBP

3.0e-26

54.7

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGD---SIVLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR SSLP PTDLHLFKE + PL        GG         +  ++W+ L L LVGDQL++ D    IVL  RFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGD---SIVLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H Y+M+Y
Subjt:  DSIKCHLPLSHCYVMKY

O60573 Eukaryotic translation initiation factor 4E type 2

1.0e-10

34.19

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--IIQL------QWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        Y H+ R   L   +D HLFKE I P+        GG  II+L      + W+ L LA++G+Q   G+ I   V+ +RF +D +S+WN  A D +    +R
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--IIQL------QWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        D+++  L L    +M+Y
Subjt:  DSIKCHLPLSHCYVMKY

Q10NQ9 Eukaryotic translation initiation factor NCBP

1.5e-25

52.99

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGD---SIVLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHL R  SLP PTDLHLFKE I PL        GG         +  ++W+ L L LVGDQL++ D    +VL +RFN+D LSVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGD---SIVLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H Y+M+Y
Subjt:  DSIKCHLPLSHCYVMKY

Q8BMB3 Eukaryotic translation initiation factor 4E type 2

1.0e-10

34.19

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--IIQL------QWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        Y H+ R   L   +D HLFKE I P+        GG  II+L      + W+ L LA++G+Q   G+ I   V+ +RF +D +S+WN  A D +    +R
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--IIQL------QWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        D+++  L L    +M+Y
Subjt:  DSIKCHLPLSHCYVMKY

Q9FK59 Eukaryotic translation initiation factor NCBP

3.0e-26

53.85

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Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR+S LP PTDLH FK+ I PL        GG        ++  ++W+ L LALVGDQL+  D+I   VL +RFN+D +SVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

Arabidopsis top hits

e value

%identity

Alignment

AT5G18110.1 novel cap-binding protein

2.1e-27

53.85

Show/hide

Query:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR
        YCHLAR+S LP PTDLH FK+ I PL        GG        ++  ++W+ L LALVGDQL+  D+I   VL +RFN+D +SVWN NA DH A M LR
Subjt:  YCHLARTSSLPRPTDLHLFKEAISPL--------GG--------IIQLQWWKYLTLALVGDQLNFGDSI---VLRIRFNKDTLSVWNCNAFDHSAAMELR

Query:  DSIKCHLPLSHCYVMKY
        DSIK HL L H YVM+Y
Subjt:  DSIKCHLPLSHCYVMKY

Sequences

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CDS sequence

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TATTGCCATTTGGCTCGTACTTCTTCATTGCCAAGGCCAACCGATCTACATCTATTTAAGGAAGCAATCAGTCCACTCGGAGGAATCATCCAACTGCAATGGTGGAAATA
TTTGACTCTCGCATTAGTGGGTGACCAACTGAATTTTGGTGACAGTATCGTGCTTAGAATTCGTTTCAACAAAGATACTTTGAGTGTCTGGAACTGCAATGCATTTGATC
ATTCGGCAGCGATGGAGTTAAGAGATTCAATAAAATGTCACTTACCACTCTCACACTGCTATGTTATGAAATAC

mRNA sequence

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Protein sequence

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YCHLARTSSLPRPTDLHLFKEAISPLGGIIQLQWWKYLTLALVGDQLNFGDSIVLRIRFNKDTLSVWNCNAFDHSAAMELRDSIKCHLPLSHCYVMKY

MC08g2064 (gene) of Bitter gourd (Dali-11) v1 genome