; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2085 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2085
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionThioredoxin-like protein YLS8
Genome locationMC08:29614566..29618250
RNA-Seq ExpressionMC08g2085
SyntenyMC08g2085
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0005682 - U5 snRNP (cellular component)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR004123 - Dim1 family
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045799.1 Thioredoxin-like protein YLS8 [Cucumis melo var. makuwa]5.31e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

NP_001341033.1 DIM 1-like protein [Glycine max]3.93e-10099.3Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

THU66596.1 hypothetical protein C4D60_Mb05t15830 [Musa balbisiana]5.58e-10098.59Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDI+ET+YRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

XP_004148041.1 thioredoxin-like protein YLS8 [Cucumis sativus]2.77e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

XP_010918377.1 thioredoxin-like protein YLS8 [Elaeis guineensis]5.58e-10098.59Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

TrEMBL top hitse value%identityAlignment
A0A0B0MLM5 Thioredoxin-like protein 4A1.34e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

A0A6J1I6E9 thioredoxin-like protein YLS81.34e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

A0A6P4D2R7 thioredoxin-like protein YLS8 isoform X11.34e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

A0A7I8L052 Hypothetical protein1.34e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

S4U0X2 YLS81.34e-100100Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

SwissProt top hitse value%identityAlignment
P83876 Thioredoxin-like protein 4A3.4e-7185.92Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWA++DKQE +DIIETVYRGARKGRGLV++PKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

P83877 Thioredoxin-like protein 4A3.4e-7185.92Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYLVDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWA++DKQE +DIIETVYRGARKGRGLV++PKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

P87215 Mitosis protein dim11.1e-6176.76Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSY LPHLHSGW VDQAIL+E+ERLVVIRFG D DE C++ DEVL  +AE + N AVIYLVDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINW L+DKQE IDIIET++RGARKG+GLVI+PKDYST++RY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

Q75BD8 Spliceosomal protein DIB12.3e-5167.39Show/hide
Query:  SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK
        S  LPHLHSGW VDQAI+ EEERLVVIRFG D D +CM MDE+L S+AE + NFA IY+ D TEVPDFN MYEL DP TVMFF++NKH+  D GTGNNNK
Subjt:  SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK

Query:  INWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTK
        +N+ + +KQE IDIIETV+RGAR+ +GLV++P DY+ K
Subjt:  INWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTK

Q9FE62 Thioredoxin-like protein YLS84.4e-7999.3Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY

Arabidopsis top hitse value%identityAlignment
AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP6.2e-2037.96Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGT
        MSYLL  L +   +D+ I    + ++V+RFG   D  C+Q DE+LA     +  FA + LVD+ +  D     + +D    PST+ FFF   H+ +D GT
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGT

Query:  GNNNKINWALKDKQEFIDIIETVYRGARKGRGLVIAP
         ++ K   A   KQ+FID++E +YRGA KG+ +V  P
Subjt:  GNNNKINWALKDKQEFIDIIETVYRGARKGRGLVIAP

AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP3.1e-8099.3Show/hide
Query:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
        MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN
Subjt:  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNN

Query:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
        KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Subjt:  KINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTACTTGCTGCCGCATCTTCACTCAGGTTGGGCCGTTGATCAAGCAATTCTCGCTGAAGAGGAACGGCTTGTGGTTATTCGATTCGGCCATGACTGGGACGAGAC
CTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCAGAGACAATTAAGAACTTTGCGGTAATATACCTTGTGGATATCACGGAGGTTCCTGATTTCAACACGATGTACG
AACTTTATGATCCTTCCACTGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTCGGTACTGGAAACAACAATAAGATAAACTGGGCGCTCAAGGATAAGCAG
GAGTTCATTGATATCATCGAAACGGTCTACCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCCAAGGACTATTCAACCAAATATCGCTACTAA
mRNA sequenceShow/hide mRNA sequence
CCCCTTCTCTCTCCTACTTTTTCAATCTCCAACCCTCAATTTCTCTCTCTCAACTCCGGCACCGCCCTAGCCACACCAAACCGCCGGCGACAGTCGCGAACGACGGCGAC
GGTGCAGTAGCAACCCCAAGCAGCATCGGCGTTGGCGAGACCCACAACGATTGAACCGCTCAAATTCGCGCCCCATACATCTAATGGCTGCTTGAAAAAAGAGAGAGAAG
GTGAGAACCAGAGATGTCGTACTTGCTGCCGCATCTTCACTCAGGTTGGGCCGTTGATCAAGCAATTCTCGCTGAAGAGGAACGGCTTGTGGTTATTCGATTCGGCCATG
ACTGGGACGAGACCTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCAGAGACAATTAAGAACTTTGCGGTAATATACCTTGTGGATATCACGGAGGTTCCTGATTTC
AACACGATGTACGAACTTTATGATCCTTCCACTGTCATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTCGGTACTGGAAACAACAATAAGATAAACTGGGCGCT
CAAGGATAAGCAGGAGTTCATTGATATCATCGAAACGGTCTACCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCCAAGGACTATTCAACCAAATATCGCTACT
AAGATGTTGTGCAAGTTCTTGTTGATGTCTCAGAAATATGTACTATATAACATTAAAGTCAGTTTTCGATGTCGGTTTTTGTTACGACTTCTCAAAACATTGAATCATTG
ATGAACCTCTGAAGAGGGTATATAACTGTTTCTGAAGTGGTCATTTTATTATGGCATAAGGTTGAATAAGCTGTTTCCTTGTCTATTGATGATGTATTGGAATGTAAAAT
CATGGAACTAAATGATTTTATGAACAAACAGATATGATACACAAATATAATGTTTATTTACCAT
Protein sequenceShow/hide protein sequence
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ
EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY