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MC08g2097 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2097
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAuxin-responsive protein
Genome locationMC08:29793483..29793794
RNA-Seq ExpressionMC08g2097
SyntenyMC08g2097
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020902.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. argyrosperma]7.33e-4467.46Show/hide
Query:  AAAEYLKKRRWPERRA--------------VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGG----GGDSGSGERRLDL
        AAAEY K RRWPE +                  EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG    GG   SG+R+LDL
Subjt:  AAAEYLKKRRWPERRA--------------VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGG----GGDSGSGERRLDL

Query:  SNAVPGHLVAYEDIENDLLLAGDLNW
        +NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  SNAVPGHLVAYEDIENDLLLAGDLNW
XP_022153356.1 auxin-responsive protein IAA33 [Momordica charantia]9.74e-6596.3Show/hide
Query:  AAAEYLKKRRWPERRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL
        AAAEYLKKRRWPERRAVAAEEDVSAV    TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL
Subjt:  AAAEYLKKRRWPERRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL

Query:  LLAGDLNW
        LLAGDLNW
Subjt:  LLAGDLNW
XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]1.00e-4468.55Show/hide
Query:  AAAEYLKKRRWPE------------RRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSG----SGERRLDLSN
        AAAEY K RRWPE            ++ +  EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG G  G    SG+R+LDL+N
Subjt:  AAAEYLKKRRWPE------------RRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSG----SGERRLDLSN

Query:  AVPGHLVAYEDIENDLLLAGDLNW
        AVPGHLVAYEDIENDLLLAGDLNW
Subjt:  AVPGHLVAYEDIENDLLLAGDLNW
XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]1.59e-4571.07Show/hide
Query:  AAAEYLKKRRWPERRA-------------VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVP
        AAAEY K RRWPE +                 EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGGGG+  SGER+LDL+NAVP
Subjt:  AAAEYLKKRRWPERRA-------------VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVP

Query:  GHLVAYEDIENDLLLAGDLNW
        GHLVAYEDIENDLLLAGDLNW
Subjt:  GHLVAYEDIENDLLLAGDLNW
XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]1.93e-4573.28Show/hide
Query:  AAAEYLKKRRWPERRAVA-------AEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDS-GSGERRLDLSNAVPGHLVA
        AAAE  K RRWPERR           EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV ++DGGGG    SGER+LDL+NAVPGH+VA
Subjt:  AAAEYLKKRRWPERRAVA-------AEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDS-GSGERRLDLSNAVPGHLVA

Query:  YEDIENDLLLAGDLNW
        YEDIENDLLLAGDLNW
Subjt:  YEDIENDLLLAGDLNW
TrEMBL top hitse value%identityAlignment
A0A1S3BRI6 Auxin-responsive protein1.70e-4374.77Show/hide
Query:  AAAEYLKKRRWPERRA---VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIE
        AAAEY K  RW ERR      AEED SAV    TVVLEGRAICQRISLHKH SYESLAKALR MFV +DD G     SGERRLDL+NAVPG++VAYEDIE
Subjt:  AAAEYLKKRRWPERRA---VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIE

Query:  NDLLLAGDLNW
        NDLLLAGDLNW
Subjt:  NDLLLAGDLNW
A0A5A7UPU6 Auxin-responsive protein1.04e-4374.77Show/hide
Query:  AAAEYLKKRRWPERRA---VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIE
        AAAEY K  RW ERR      AEED SAV    TVVLEGRAICQRISLHKH SYESLAKALR MFV +DD G     SGERRLDL+NAVPG++VAYEDIE
Subjt:  AAAEYLKKRRWPERRA---VAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIE

Query:  NDLLLAGDLNW
        NDLLLAGDLNW
Subjt:  NDLLLAGDLNW
A0A6J1DKE3 Auxin-responsive protein4.71e-6596.3Show/hide
Query:  AAAEYLKKRRWPERRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL
        AAAEYLKKRRWPERRAVAAEEDVSAV    TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL
Subjt:  AAAEYLKKRRWPERRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDL

Query:  LLAGDLNW
        LLAGDLNW
Subjt:  LLAGDLNW
A0A6J1FIF6 Auxin-responsive protein2.49e-4365.89Show/hide
Query:  AAAEYLKKRRWPERRAVAA-----------------EEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGE----RR
        AAAEY K RRWPE +  +                  EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG G  G GE    R+
Subjt:  AAAEYLKKRRWPERRAVAA-----------------EEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGE----RR

Query:  LDLSNAVPGHLVAYEDIENDLLLAGDLNW
        LDL+NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  LDLSNAVPGHLVAYEDIENDLLLAGDLNW
A0A6J1I3D9 Auxin-responsive protein4.85e-4568.55Show/hide
Query:  AAAEYLKKRRWPE------------RRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSG----SGERRLDLSN
        AAAEY K RRWPE            ++ +  EED +AV    TVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG G  G    SG+R+LDL+N
Subjt:  AAAEYLKKRRWPE------------RRAVAAEEDVSAV----TVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSG----SGERRLDLSN

Query:  AVPGHLVAYEDIENDLLLAGDLNW
        AVPGHLVAYEDIENDLLLAGDLNW
Subjt:  AVPGHLVAYEDIENDLLLAGDLNW
SwissProt top hitse value%identityAlignment
Q69VE0 Auxin-responsive protein IAA234.3e-0735.29Show/hide
Query:  WPERRAV---AAEED---VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVP--EDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDL
        WP  RA    A  ED      V V ++G    +++ L  HA Y  L +AL GMF       GGGG  G G + +DL      ++  YED + D +L GD+
Subjt:  WPERRAV---AAEED---VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVP--EDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDL

Query:  NW
         W
Subjt:  NW
Q9FKM7 Auxin-responsive protein IAA331.2e-2267.07Show/hide
Query:  VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW
        V  VTVVLEGR+ICQRISL KH SY+SLA ALR MFV        D       LDLSNA+PGHL+AYED+ENDLLLAGDL W
Subjt:  VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW
Arabidopsis top hitse value%identityAlignment
AT4G29080.1 phytochrome-associated protein 21.6e-0432.97Show/hide
Query:  EEDVSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVP------EDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW
        E+    V V +EG    ++I L  + SY  L+ AL  MF           GG G  G  E RL        ++V YED ++D +L GD+ W
Subjt:  EEDVSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVP------EDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW
AT5G57420.1 indole-3-acetic acid inducible 338.8e-2467.07Show/hide
Query:  VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW
        V  VTVVLEGR+ICQRISL KH SY+SLA ALR MFV        D       LDLSNA+PGHL+AYED+ENDLLLAGDL W
Subjt:  VSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTGCGGCGGAGTACTTGAAGAAGAGGAGGTGGCCGGAGAGGAGAGCGGTGGCGGCGGAGGAGGATGTGTCGGCGGTGACGGTGGTGCTGGAGGGGCGGGCGATCTGCCA
GCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTGGCCAAAGCCCTCAGAGGGATGTTCGTGCCGGAGGACGACGGCGGCGGAGGAGACTCCGGCTCCGGCGAGC
GGCGGCTTGACCTTTCGAACGCGGTTCCGGGTCATCTTGTTGCTTATGAAGACATTGAAAACGATCTTCTTCTTGCTGGTGACCTCAATTGG
mRNA sequenceShow/hide mRNA sequence
GCTGCGGCGGAGTACTTGAAGAAGAGGAGGTGGCCGGAGAGGAGAGCGGTGGCGGCGGAGGAGGATGTGTCGGCGGTGACGGTGGTGCTGGAGGGGCGGGCGATCTGCCA
GCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTGGCCAAAGCCCTCAGAGGGATGTTCGTGCCGGAGGACGACGGCGGCGGAGGAGACTCCGGCTCCGGCGAGC
GGCGGCTTGACCTTTCGAACGCGGTTCCGGGTCATCTTGTTGCTTATGAAGACATTGAAAACGATCTTCTTCTTGCTGGTGACCTCAATTGG
Protein sequenceShow/hide protein sequence
AAAEYLKKRRWPERRAVAAEEDVSAVTVVLEGRAICQRISLHKHASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNW