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MC08g2122 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2122
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationMC08:30161039..30161398
RNA-Seq ExpressionMC08g2122
SyntenyMC08g2122
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]1.01e-1645.45Show/hide
Query:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL
        S G KRKR S   E +E++++AM F   QL+ IA WP+EK   E   R EV+ QL+ I +L  R   KL+ ILF +V+ I GFLS+P+  +  YC  LL
Subjt:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.58e-3153.78Show/hide
Query:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING
        EED   TPTSK + +GT+S G KRKRS Y+SEM+++++T MR QT  LEK+A WP++K +++ ARRK V DQLKQIP+L+    V+LV IL TNV+K   
Subjt:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING

Query:  FLSVPLHWRERYCRYLLGK
        FL VP+ +++ +C  LLGK
Subjt:  FLSVPLHWRERYCRYLLGK

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]1.89e-1636.13Show/hide
Query:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING
        +E+  E  T + S    +S G KRKRSS+  EMI+++++ +   +  + ++A+W ++KY+ E  R+KEV++ +  I  LD    V L+ ++ T++QK + 
Subjt:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING

Query:  FLSVPLHWRERYCRYLLGK
        FL+VP H  +RYC  LLG+
Subjt:  FLSVPLHWRERYCRYLLGK

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]8.91e-1737.82Show/hide
Query:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING
        +E+  E  T + S    +S G KRKRSS+  EMI+++++ +  Q+  + ++A+W  EKY+ E    KEV++ +  I DL+    V L+ ++ T++QK + 
Subjt:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING

Query:  FLSVPLHWRERYCRYLLGK
        FL+VP H R+RYC  LLG+
Subjt:  FLSVPLHWRERYCRYLLGK

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]1.13e-1938.66Show/hide
Query:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING
        +E+  E  T + S L  +S G KRKR S+ +EMI+++++ +  Q+  + ++A+W +EKY+ E  RRKEV++ +  I  LD    V  + +L T++QK + 
Subjt:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING

Query:  FLSVPLHWRERYCRYLLGK
        FL+VP H R+RYC +LL +
Subjt:  FLSVPLHWRERYCRYLLGK

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI19.07e-1644.44Show/hide
Query:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL
        S G KRK+ S   E +E++++A+ F   QL+ IA WP+EK   E   R EV+ QL+ IP+L  R   KL+ ILF +V+ I GFLS+P   +  YC  LL
Subjt:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL

A0A5A7U0H7 Retrotransposon protein1.26e-1342.11Show/hide
Query:  KRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL
        KRKR S   E +E++++ M F   QL+ IA WP+EK   E   R +V+ QL+ IP L  +   KL+ ILF +++ I GFLS+P   +  YC  LL
Subjt:  KRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL

A0A5D3BZU3 Retrotransposon protein2.85e-1544.44Show/hide
Query:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL
        S G KRKR S   EM+E++ +A  F   QL+ I  WP+EK   E   R EV+ QL+ IP L  +   KL+ ILF +V+ I GFLS+P   +  YC  LL
Subjt:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL

A0A5D3CT52 Retrotransposon protein4.87e-1745.45Show/hide
Query:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL
        S G KRKR S   E +E++++AM F   QL+ IA WP+EK   E   R EV+ QL+ I +L  R   KL+ ILF +V+ I GFLS+P+  +  YC  LL
Subjt:  SIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERYCRYLL

A0A6J1DW73 uncharacterized protein LOC1110250187.66e-3253.78Show/hide
Query:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING
        EED   TPTSK + +GT+S G KRKRS Y+SEM+++++T MR QT  LEK+A WP++K +++ ARRK V DQLKQIP+L+    V+LV IL TNV+K   
Subjt:  EEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKING

Query:  FLSVPLHWRERYCRYLLGK
        FL VP+ +++ +C  LLGK
Subjt:  FLSVPLHWRERYCRYLLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGAGGAGGACTCGCTGGAGACGCCTACAAGTAAGCTCAGTGCTTTAGGAACGGCATCAATAGGAAGGAAGAGGAAACGAAGTTCCTATTCATCGGAAATGATAGAGAT
GCTCCAAACAGCAATGCGTTTTCAAACGATTCAGCTTGAGAAGATTGCAGCGTGGCCGGAGGAGAAGTACAAACGGGAGGCTGCACGAAGGAAAGAAGTGCTTGACCAGC
TTAAACAAATACCGGACTTGGACGGGCGTGCCATTGTAAAACTTGTACATATTTTGTTCACTAATGTTCAGAAGATCAATGGTTTCCTATCTGTCCCGCTGCACTGGAGA
GAAAGGTATTGCAGGTATCTGTTGGGAAAA
mRNA sequenceShow/hide mRNA sequence
TTTGAGGAGGACTCGCTGGAGACGCCTACAAGTAAGCTCAGTGCTTTAGGAACGGCATCAATAGGAAGGAAGAGGAAACGAAGTTCCTATTCATCGGAAATGATAGAGAT
GCTCCAAACAGCAATGCGTTTTCAAACGATTCAGCTTGAGAAGATTGCAGCGTGGCCGGAGGAGAAGTACAAACGGGAGGCTGCACGAAGGAAAGAAGTGCTTGACCAGC
TTAAACAAATACCGGACTTGGACGGGCGTGCCATTGTAAAACTTGTACATATTTTGTTCACTAATGTTCAGAAGATCAATGGTTTCCTATCTGTCCCGCTGCACTGGAGA
GAAAGGTATTGCAGGTATCTGTTGGGAAAA
Protein sequenceShow/hide protein sequence
FEEDSLETPTSKLSALGTASIGRKRKRSSYSSEMIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWR
ERYCRYLLGK