; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2148 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2148
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTranslation initiation factor IF-3
Genome locationMC08:30440291..30444496
RNA-Seq ExpressionMC08g2148
SyntenyMC08g2148
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]6.99e-16082.94Show/hide
Query:  MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]4.13e-16386.29Show/hide
Query:  MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]1.12e-193100Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF
        MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Subjt:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_022969585.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]7.01e-15682.88Show/hide
Query:  MAGLTSRFPFKPLLSQSSAT-TSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLT RFPFKPLLS SSAT T+SAAA SSS+ A A P RTSISPLPLSSS+ NAF FR HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD 
Subjt:  MAGLTSRFPFKPLLSQSSAT-TSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ+EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]3.11e-16988.89Show/hide
Query:  MAGLTSRFPFKPLLSQSS-ATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVS----SPIRRSVFARFGGAPRSSGPADSKR
        MAGL+ RFPFKPLLSQS+ ATT+SAAA++SSS+A   PFRTSI PLPLSSS++NAF FRL  SNSLRL+VS    SPIR SVF+R+GGAPRSSGPADSKR
Subjt:  MAGLTSRFPFKPLLSQSS-ATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVS----SPIRRSVFARFGGAPRSSGPADSKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        SDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSAGV
        DYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKD PA+NEVSAGV
Subjt:  DYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-33.38e-16082.94Show/hide
Query:  MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A1S3BV82 Translation initiation factor IF-32.00e-16386.29Show/hide
Query:  MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQSSA   TTS AAA +SSS+    PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A6J1DYM5 Translation initiation factor IF-35.44e-194100Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF
        MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Subjt:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-31.51e-15482.19Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF
        MAGL+ RFPFK + SQSSAT ++   +SSSS+A   PFRTSI PLPL SS+SNAF FRLHNSNSLRL VSSPIR SVFAR+GGAPRSSGPA SKRS+D  
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDF

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
         LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPA-INEVSAGV
        L+AA++FL+DGDKVKVIVNLKGRENEFR IAIEL++RFQ+E+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKD PA +NEVSA V
Subjt:  LKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPA-INEVSAGV

A0A6J1I0C0 Translation initiation factor IF-33.40e-15682.88Show/hide
Query:  MAGLTSRFPFKPLLSQSSAT-TSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLT RFPFKPLLS SSAT T+SAAA SSS+ A A P RTSISPLPLSSS+ NAF FR HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD 
Subjt:  MAGLTSRFPFKPLLSQSSAT-TSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ+EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-31.1e-3142.61Show/hide
Query:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  D       IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A+RFLK GDKVK  +  +GRE +  N+A EL+ R   ++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.2e-7563.18Show/hide
Query:  SISPLPLSSSESNAFGFRLHNSN-SLRLIVSSPIRR-SVFARFGGAP---RSSGP---ADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQ
        ++S   L S +S     RL  +  S   +  SP R  +V  RFGG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++
Subjt:  SISPLPLSSSESNAFGFRLHNSN-SLRLIVSSPIRR-SVFARFGGAP---RSSGP---ADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQ

Query:  MAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI
        MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAI
Subjt:  MAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI

Query:  ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA
        EL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Subjt:  ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA

Q3MBH6 Translation initiation factor IF-37.0e-3142.13Show/hide
Query:  PADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   D       IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A RFLKDGDKVK  V  +GRE +  ++A +L++R   ++      ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-37.0e-3142.13Show/hide
Query:  PADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   D       IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A RFLKDGDKVK  V  +GRE +  ++A +L++R   ++      ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic3.2e-7658.5Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS
        MAG+TS   F  +L+ ++ T S    S         P  + +S  P       A   R                       GG   S  P D     K S
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS

Query:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
        +DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Subjt:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD

Query:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        YSVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein2.9e-0830.68Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + + V  VS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  RRFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         + ++ G +VK + V  K +  E      +EL+ RF   IG+ A  E+    DR   +V+V +         PPKK
Subjt:  RRFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein8.7e-7763.18Show/hide
Query:  SISPLPLSSSESNAFGFRLHNSN-SLRLIVSSPIRR-SVFARFGGAP---RSSGP---ADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQ
        ++S   L S +S     RL  +  S   +  SP R  +V  RFGG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++
Subjt:  SISPLPLSSSESNAFGFRLHNSN-SLRLIVSSPIRR-SVFARFGGAP---RSSGP---ADSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQ

Query:  MAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI
        MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAI
Subjt:  MAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI

Query:  ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA
        EL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Subjt:  ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA

AT4G30690.1 Translation initiation factor 3 protein2.3e-7758.5Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS
        MAG+TS   F  +L+ ++ T S    S         P  + +S  P       A   R                       GG   S  P D     K S
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS

Query:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
        +DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Subjt:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD

Query:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        YSVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA

AT4G30690.2 Translation initiation factor 3 protein2.3e-6150.68Show/hide
Query:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS
        MAG+TS   F  +L+ ++ T S    S         P  + +S  P       A   R                       GG   S  P D     K S
Subjt:  MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKRS

Query:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
        +DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                              YNIDQHD
Subjt:  DDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD

Query:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        YSVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  YSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCCTCC
CTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAATTC
GTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCCGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCAAAT
AATGTGAGACTTATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCCGA
TGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAATTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCAACTCGCATGGATTTGA
AAGAGCTTAAAATGGGTTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACAAGGTTAAAGTTATAGTGAACTTG
AAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAA
TATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGAAGTTTCGGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTCGTTATAATGATGATAAGGAAGTAGAAAATGAGCTATAACAAAAGGCAACTAAAATGATTTTTCCGAAAAAAAAAATTAATAATAATAGAGTCCACTCCACAGTCCAA
AATTATTGTGGATAAGATTTTTAATTTTCTTTTTCAATTTCTTGAAAAATTTTGGCCAAACTTCCACCATTCCACTGCCCCTTCAACAGCTCAAAGCTATGGCTGGGCTC
ACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCCTCCCTTCCGAACCTC
AATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAATTCGTCGCTCTGTAT
TTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCCGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAATGTGAGACTT
ATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACCCGATGCAGATCCTCC
AGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAATTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAA
TGGGTTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAG
AATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGT
TCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGAAGTTTCGGCTGGTGTTTAAGCTCGGAAAGCGTCGA
GCTTGTGCCTAAAATAGAACGCATCAGTTTTTCTGGGTAGGGAATGGAGATGTTATTTTCTCCGCGGGGACGCCCATAACAGGGCGAGCTTCCGTGAGGCGGCAGTGAGG
GACATTGTCCTTGTCACCTAAATGCGGACGGGCAATACGTACTCTATCCCGCCCCATTCTTGATGTTGTTGACATTTTATCAATATTTCTTGACATCTATATTTTACCCT
TTGTCGACAATATTTTCTTAATAAGACGATATTTTACCCTTCGTTGAGGTGTCGAACCCTCTGACATCAATGTTGCTTGACATTTTAAACACCACTTATAAATCAATC
Protein sequenceShow/hide protein sequence
MAGLTSRFPFKPLLSQSSATTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSN
NVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNL
KGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV