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MC08g2172 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2172
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationMC08:30639473..30639730
RNA-Seq ExpressionMC08g2172
SyntenyMC08g2172
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]1.11e-1653.33Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        NN+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

KAA0056089.1 hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa]5.07e-2965.52Show/hide
Query:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE
        MA+S+NNK+QK  KS+S  C FS FG+FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I+ QIR SE +
Subjt:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE

KAG6586063.1 hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]3.05e-2763.53Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE
        AS+NNK+QKP+   S SC FS F +F++RDSR+RRD  + ++D RKVWPSD D+ ++WVAEPGIDRKAKAYID+I+ QIR S TE
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE

KAG6599163.1 hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]1.16e-2767.44Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDD-AMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE
        ASSN++++KP+   S SC FS   +FK+R  R+R D D  AMEDTRKVWPSD DKG+HWVAEPGIDRKAKAYIDRI YQIR+S  E
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDD-AMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE

KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]1.11e-1653.33Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        NN+Q+K      A   FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

TrEMBL top hitse value%identityAlignment
A0A0A0KAK6 Uncharacterized protein5.38e-1753.33Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        NN+Q+K      A   FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

A0A0A0KBW1 Uncharacterized protein2.12e-1652.81Show/hide
Query:  NKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        N+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E
Subjt:  NKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

A0A0A0LJ24 Uncharacterized protein2.46e-2964.37Show/hide
Query:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE
        MA+S+NNK+QK +KS+S  C FS F +FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I+ QIR S+T+
Subjt:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE

A0A5A7SWT9 Uncharacterized protein5.38e-1753.33Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        NN+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

A0A5D3BDY2 Uncharacterized protein2.46e-2965.52Show/hide
Query:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE
        MA+S+NNK+QK  KS+S  C FS FG+FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I+ QIR SE +
Subjt:  MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein3.0e-0948.68Show/hide
Query:  RKSSSASCLFSWFGVFKARDSRR-RRDGD-DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        +  S +S  FS F  FK R S R   DG  D    TRK   SD DK ++WVAEPGIDRKA A+I + +  R SE+E
Subjt:  RKSSSASCLFSWFGVFKARDSRR-RRDGD-DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE

AT5G26620.1 unknown protein6.6e-0950.85Show/hide
Query:  RDSRRRRDGDDAMED---TRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE
        R S  R + D + +D   TRK W SD DK ++WVAEPGIDRKA A+I + +  R SE+E
Subjt:  RDSRRRRDGDDAMED---TRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCATCCAGCAACAACAAGCAGCAGAAGCCAAGGAAGTCATCGTCGGCCTCGTGTCTCTTTTCGTGGTTCGGCGTGTTCAAGGCTCGAGACAGTAGGAGGAGGCG
GGACGGGGACGATGCGATGGAAGACACACGAAAAGTGTGGCCGAGCGACAGCGACAAGGGCAAGCACTGGGTGGCTGAGCCTGGCATCGATAGGAAAGCGAAGGCTTACA
TCGATAGGATCTACCAAATCCGCTTCTCCGAAACCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCATCCAGCAACAACAAGCAGCAGAAGCCAAGGAAGTCATCGTCGGCCTCGTGTCTCTTTTCGTGGTTCGGCGTGTTCAAGGCTCGAGACAGTAGGAGGAGGCG
GGACGGGGACGATGCGATGGAAGACACACGAAAAGTGTGGCCGAGCGACAGCGACAAGGGCAAGCACTGGGTGGCTGAGCCTGGCATCGATAGGAAAGCGAAGGCTTACA
TCGATAGGATCTACCAAATCCGCTTCTCCGAAACCGAG
Protein sequenceShow/hide protein sequence
MAASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETE