; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2173 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2173
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein S23-1
Genome locationMC08:30642980..30645852
RNA-Seq ExpressionMC08g2173
SyntenyMC08g2173
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]6.87e-67100Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]1.45e-5989.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]3.55e-6090.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]1.02e-5989.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDG++MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]4.48e-6394.95Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR LGFSDGEVMRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVV+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939373.67e-5786.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
A0A5D3BBN9 40S ribosomal protein S23-13.67e-5786.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
A0A6J1DQC3 uncharacterized protein LOC1110232543.32e-67100Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
A0A6J1FAF1 uncharacterized protein LOC1114438687.01e-6089.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
A0A6J1I1J3 uncharacterized protein LOC1114685991.72e-6090.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
AT1G57540.2 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
AT1G57540.3 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTGGGAGG
AGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGTGCAACCTCGG
CTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAAAAAAAACCATTGTGCTCTACTATCCGTGTCTTCTTCTCTCCAGAGTCGCAATTCTCTGTACTACTTGAACTCAGACCAGCGGCGCGGCGCCAACCCATAAGG
AAATCTACAGATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCCACAGTTGATGAAACAGACTGCTGGGTTATGTA
CTGTGGGAGGAGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGT
GCAACCTCGGCTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGGTGATTTGCATTCAGAGATCAACA
ATCGTAACCATAATGGTAACATATTATTTCCTTTCTTAAATATAGAATTACAAATGCGAGTGGGAGACTCAATCTTTCAACTTACAAGAGAGGTTACTAATGTCTTGATT
GTTTTACTGAATGTTGCTATTCATACAAGTCTAGATTAAGGAAAGTTGTTAGGTGATTGACATTCAGAGATCAACAATCACATTTGTAATGGGACGGATTCTTTCTTTCT
TAAATATAGAATGACAAATGTGAGATTGAACTCAAAGAGGCTACTAAATATCTTAACCGTTTTAATACGGACACTAACGAACTCATATATTATCTTTTTCACAGTCTCCT
CTATATAATGAGTCTGCCATTTGATCCTAATCAGAAAGATTGATGTATATGTGATCAAGAACTTCTTCTTTCTCTCCCTATTTGTTGTTCTTTTGAGAAGTTGCCTATGT
CTAGATAAAAAACTTTTGAAAT
Protein sequenceShow/hide protein sequence
MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR