CuGenDBv2

Gene ID	MC08g2229
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA double-strand break repair Rad50 ATPase
Genome location	MC08:31091630..31093896
RNA-Seq Expression	MC08g2229
Synteny	MC08g2229
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136915.2 uncharacterized protein LOC101209598 [Cucumis sativus]

1.04e-99

78.35

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL ELGTL S+ LSG+ QGLELLRRP+IN +SKLIE+VIE +NTENL+SY EAGCINTHDG QSTKKLHTCR+GLDDHLKKARSLIDELE L N+ NI L
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        ETEN    ST+SDED+ELDEEEATVP +K DAN+YA+ MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+MWSL+PYIDDEI+R AWKLV
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

XP_022150735.1 uncharacterized protein LOC111018794 [Momordica charantia]

1.00e-127

97.44

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL+ELGTL S+FLSG  QGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL
        ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL

XP_023537979.1 uncharacterized protein LOC111798860 [Cucurbita pepo subsp. pepo]

7.99e-100

78.79

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        +L+ELGTL S+ LSGV QGLELLRRPAINR+SKLIE+VIETNN+E+L+SYFEAGCI THDG+QS+KKLHTCR+GLDDHLKK RSL +ELE LL++ NIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDED----VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        E EN P ASTVSDED    VEL++EEAT+PD+K DANEYAL MGIIK MVKKD+IMQEKIISGLSLKSSSGELETY +MWSLRPYIDDEI++RAWKL+
Subjt:  ETENSPRASTVSDED----VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

XP_038887975.1 uncharacterized protein LOC120077932 isoform X1 [Benincasa hispida]

1.14e-103

79.9

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL+ELGTL S+ LSG+ QGLELLRRPAINR+SKLIE+VIETNNTE+L+SY EAGCINTHD VQSTKKLH+CR+GLDDHLKKARS+ID+LE LLN+ NIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        ETEN P +STVSDED+E +E+EATVP++K DANEYAL MGIIK MVKK++ MQEKIISGLSLKSSSGELETYC+MWSL+PYIDDEI+ +AWKLV
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

XP_038887977.1 uncharacterized protein LOC120077932 isoform X2 [Benincasa hispida]

5.51e-104

79.9

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL+ELGTL S+ LSG+ QGLELLRRPAINR+SKLIE+VIETNNTE+L+SY EAGCINTHD VQSTKKLH+CR+GLDDHLKKARS+ID+LE LLN+ NIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        ETEN P +STVSDED+E +E+EATVP++K DANEYAL MGIIK MVKK++ MQEKIISGLSLKSSSGELETYC+MWSL+PYIDDEI+ +AWKLV
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2B6 Uncharacterized protein

5.02e-100

78.35

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL ELGTL S+ LSG+ QGLELLRRP+IN +SKLIE+VIE +NTENL+SY EAGCINTHDG QSTKKLHTCR+GLDDHLKKARSLIDELE L N+ NI L
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        ETEN    ST+SDED+ELDEEEATVP +K DAN+YA+ MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+MWSL+PYIDDEI+R AWKLV
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

A0A1S3C0U3 uncharacterized protein LOC103495347 isoform X3

1.44e-99

77.84

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL ELGT  S+ LSG+ QGLELLRRP+IN +SKLIE+VIET+NTENL++Y EAGCINTHDG QSTKKLHTCR+GLDDHLKKARSLIDELE L N+ NI L
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        ETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+MWSL+PYIDD I+  AWKLV
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

A0A6J1D9B8 uncharacterized protein LOC111018794

4.86e-128

97.44

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        KL+ELGTL S+FLSG  QGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL
        ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL
Subjt:  ETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL

A0A6J1FDP7 uncharacterized protein LOC111444445

1.37e-99

79.08

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        +L+ELGTL S+ LSGV QGLELLRRPAINR+SKLIE+V+ETNNTE+L+SYFEAGCI THDG+QS+KKLHTCR+GLDDHLKK RSL +ELE LL++ NIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDED--VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        E EN   ASTVSDED  VEL++EEAT+PD+K DANEYAL MGIIK MVKKD+IMQEKIISGLSLKSSSGELETY +MWSLRPYIDDEI++RAWKL+
Subjt:  ETENSPRASTVSDED--VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

A0A6J1HNU3 uncharacterized protein LOC111465322

1.18e-98

76.53

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        +L+ELGTL S+ LSGV QGLELLRRPA+NR+SKLIE+V+ETNNTE+L+SYFEAGCI TH+G+QS+KKLH C +GLDDHLKK RSL +ELE LL++ NIAL
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENSPRASTVSDED--VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        E EN P ASTVSDED  VEL+ EEAT+PD+K DANEYAL MGIIK M+KKD+IMQEKI+SGLSLKSSSGELETY +MWSLRPYIDDEI++RAWKL+
Subjt:  ETENSPRASTVSDED--VELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49645.1 unknown protein

1.4e-46

50.51

Show/hide

Query:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL
        +L+ELG   + FL    QGL  L+RP I  SSKLIE++I+ N T  LKSY EAGCIN HD  QST+ LHT   GL DHL KA++L+ ELE L + A +A+
Subjt:  KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIAL

Query:  ETENS-PRASTVSDEDVELDEEEATVP-DEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        E+     + S+   + V  DEE  TV   +  +  EYA  + +I  M+K++Y+MQ+KI+  LSLKSSSGELETY +MWSLRP+++DEI+ RAWK +
Subjt:  ETENS-PRASTVSDEDVELDEEEATVP-DEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

AAGCTCAAGGAATTGGGGACTCTAGAAAGCAAGTTTCTTTCTGGCGTTGTGCAAGGGCTTGAGCTTCTTCGACGACCTGCTATAAATAGATCATCAAAATTGATTGAGGA
TGTCATAGAAACTAACAATACGGAGAATCTTAAATCATACTTTGAAGCTGGATGCATCAACACTCATGATGGTGTCCAAAGTACAAAAAAGTTGCATACATGCCGGATTG
GACTGGATGATCATTTGAAAAAAGCAAGGAGCTTAATTGATGAACTCGAACACCTACTCAATAATGCGAATATTGCATTGGAAACTGAAAATTCACCGCGTGCTTCAACT
GTCTCCGATGAAGATGTAGAATTGGATGAAGAAGAAGCAACCGTTCCAGATGAGAAACTTGATGCTAATGAATATGCTTTATTTATGGGGATCATCAAATTTATGGTCAA
GAAAGACTACATAATGCAGGAGAAGATTATTTCTGGTCTAAGTCTCAAATCATCCTCCGGGGAACTCGAAACGTACTGCGTCATGTGGTCGCTACGACCCTATATTGACG
ATGAAATCATACGTCGAGCTTGGAAGCTCGTTCTGTGACTGGTAACAACTCTCTCTGTGAATGATTTTGTCTTTGAGATATCAATAGCTTGCAGTAAGTTCAATAGCCAA
AGGCTGATAATTGTGGTTTCTTTTAAATCAATATCCTCCCCGGGAGCATCAGAATTTGAAAGTTAGACAGCTTAGTTGATCTTGTGATTATGCTTTTTTACAGATTGAAT
GGAATTTTTTTCATTATGAAGTTTGTAAAGAATGACTTATATTACAGATATATGACATAAATGCATATTTTTGTTGGATTTGTTTATTGGATAAAAATAAG

Protein sequence

Show/hide protein sequence

KLKELGTLESKFLSGVVQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRAST
VSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLVL

MC08g2229 (gene) of Bitter gourd (Dali-11) v1 genome