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MC08g2230 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2230
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein At5g49610-like
Genome locationMC08:31097270..31097527
RNA-Seq ExpressionMC08g2230
SyntenyMC08g2230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043777.1 F-box protein [Cucumis melo var. makuwa]1.05e-0535.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y   +      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
TYK25356.1 F-box protein [Cucumis melo var. makuwa]4.09e-0635.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y  ++      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
XP_008443600.1 PREDICTED: F-box protein At5g49610-like [Cucumis melo]1.06e-0535.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y   +      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
XP_022154661.1 F-box protein At5g49610-like [Momordica charantia]1.90e-3470Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVS-HLFKETKFYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN---RRLNPQTMVKILQK
        KRIWTK+LDLAMEMP AFYSSDV ++  +F E KF NFVHGGC YSP +  MY CPD+FPFL DFEPCN FD    RRLNP+TM+KIL+K
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVS-HLFKETKFYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN---RRLNPQTMVKILQK
TrEMBL top hitse value%identityAlignment
A0A1S3B7Y4 F-box protein At5g49610-like5.13e-0635.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y   +      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
A0A5A7TPP2 F-box protein5.07e-0635.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y   +      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
A0A5D3DNY0 F-box protein1.98e-0635.56Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
        K++W KKLD +  MP  FY SD+ +  L  ++    F N   G   Y  ++      P +FPFL DFE  NF    R + P+ + KIL++
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETK---FYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN-RRLNPQTMVKILQK
A0A6J1DPD6 F-box protein At5g49610-like9.21e-3570Show/hide
Query:  KRIWTKKLDLAMEMPRAFYSSDVVVS-HLFKETKFYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN---RRLNPQTMVKILQK
        KRIWTK+LDLAMEMP AFYSSDV ++  +F E KF NFVHGGC YSP +  MY CPD+FPFL DFEPCN FD    RRLNP+TM+KIL+K
Subjt:  KRIWTKKLDLAMEMPRAFYSSDVVVS-HLFKETKFYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDN---RRLNPQTMVKILQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGAATATGGACCAAAAAGTTAGATCTGGCCATGGAGATGCCTAGGGCATTTTACTCCTCTGATGTTGTGGTGAGCCATCTGTTTAAGGAGACCAAGTTCTATAATTT
CGTGCATGGAGGTTGCGTTTATAGCCCTATGCAATGGCCAATGTATAGGTGTCCTGATATTTTTCCTTTCTTGTTGGATTTTGAGCCATGCAATTTCTTCGACAATCGAC
GTCTCAACCCTCAAACTATGGTCAAGATCCTTCAAAAA
mRNA sequenceShow/hide mRNA sequence
AAGAGAATATGGACCAAAAAGTTAGATCTGGCCATGGAGATGCCTAGGGCATTTTACTCCTCTGATGTTGTGGTGAGCCATCTGTTTAAGGAGACCAAGTTCTATAATTT
CGTGCATGGAGGTTGCGTTTATAGCCCTATGCAATGGCCAATGTATAGGTGTCCTGATATTTTTCCTTTCTTGTTGGATTTTGAGCCATGCAATTTCTTCGACAATCGAC
GTCTCAACCCTCAAACTATGGTCAAGATCCTTCAAAAA
Protein sequenceShow/hide protein sequence
KRIWTKKLDLAMEMPRAFYSSDVVVSHLFKETKFYNFVHGGCVYSPMQWPMYRCPDIFPFLLDFEPCNFFDNRRLNPQTMVKILQK