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MC08g2308 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2308
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRubredoxin
Genome locationMC08:31954358..31954939
RNA-Seq ExpressionMC08g2308
SyntenyMC08g2308
Gene Ontology termsGO:0010207 - photosystem II assembly (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0043448 - alkane catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR018527 - Rubredoxin, iron-binding site
IPR024934 - Rubredoxin-like domain
IPR024935 - Rubredoxin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33910.1 rubredoxin [Cucumis melo subsp. melo]7.13e-11183.58Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV
        A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDVSKEDKPTS +PN P+       E+  EKFD RRLEE+FAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

XP_004139218.2 uncharacterized protein LOC101219075 [Cucumis sativus]5.34e-10984.16Show/hide
Query:  AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFA
        A Y+SARPT LSFHLSQPSLPIPR NFKPP  A   AAI PL RS+AARP S+F LNSIDVSKEDKPTS +PN P        EE  EKFD RRLEEKFA
Subjt:  AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFA

Query:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF
        VLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLSGYF
Subjt:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF

Query:  LQ
        LQ
Subjt:  LQ

XP_016901839.1 PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo]1.06e-10983.58Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV
        A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDVSKEDKPTS +PN P+       E+  EKFD RRLEE+FAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

XP_023545844.1 uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo]1.94e-10681.59Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPN-------PPAEEAAEKFDPRRLEEKFAV
        AAYASARPTLSFHLSQPS+P PR NFKPP  A       PLQRSAAARP  +F LNSIDVSKEDKPTS +P+         AE A EK D RR+EEKFAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPN-------PPAEEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYG+L FFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

XP_038891199.1 rubredoxin [Benincasa hispida]3.32e-11384.8Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPT----AAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPP------AEEAAEKFDPRRLEEK
        AAY+SARPTLSFHLSQPSLPIPR NFKPP     AAAT  A+ PLQRSAAARP+S+F LNSIDVSKEDKPTS +PN P      A +  EKFD RRLEEK
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPT----AAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPP------AEEAAEKFDPRRLEEK

Query:  FAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSG
        FAVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLSG
Subjt:  FAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSG

Query:  YFLQ
        YFLQ
Subjt:  YFLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJE4 Rubredoxin-like domain-containing protein2.58e-10984.16Show/hide
Query:  AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFA
        A Y+SARPT LSFHLSQPSLPIPR NFKPP  A   AAI PL RS+AARP S+F LNSIDVSKEDKPTS +PN P        EE  EKFD RRLEEKFA
Subjt:  AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFA

Query:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF
        VLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLSGYF
Subjt:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF

Query:  LQ
        LQ
Subjt:  LQ

A0A1S4E0U3 uncharacterized protein LOC1034995485.14e-11083.58Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV
        A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDVSKEDKPTS +PN P+       E+  EKFD RRLEE+FAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

A0A5A7VDM5 Rubredoxin3.45e-11183.58Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV
        A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDVSKEDKPTS +PN P+       E+  EKFD RRLEE+FAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

A0A6J1G4B1 uncharacterized protein LOC1114506242.59e-10683Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA---EEAA---EKFDPRRLEEKFAVL
        AAYASARPTLSFHLSQPS+P PR NFKPP  A       PLQRSAAARP  +F LNSIDVSKEDKPTS +P+  A   EEAA   EK D RR+EEKFAVL
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA---EEAA---EKFDPRRLEEKFAVL

Query:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ
        NTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYG+L FFFALFLSGYFLQ
Subjt:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ

E5GBR8 Rubredoxin3.45e-11183.58Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV
        A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDVSKEDKPTS +PN P+       E+  EKFD RRLEE+FAV
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAV

Query:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL
        LNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYFL
Subjt:  LNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFL

Query:  Q
        Q
Subjt:  Q

SwissProt top hitse value%identityAlignment
P00270 Rubredoxin7.0e-1154Show/hide
Query:  IYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK
        IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Subjt:  IYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK

P73068 Rubredoxin9.1e-1943.4Show/hide
Query:  EEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIA--GFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFA
        E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +++F S     A  GFA+N  YG G N ++ G+K +LI+GSL   F 
Subjt:  EEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIA--GFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFA

Query:  LFLSGY
         FLS Y
Subjt:  LFLSGY

Q9FDN6 High molecular weight rubredoxin9.1e-1146.38Show/hide
Query:  EAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFE
        + A  F   R ++K A L +  Y+C  C + +D   GDP + IAPG PF  LPEDW CP CGA K  FE
Subjt:  EAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFE

Q9WWN1 Rubredoxin1.3e-1745.79Show/hide
Query:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF
        AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   +   +GF +N  YGLG N LT  QK +LI+G+L   F  F
Subjt:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF

Query:  LSGYFLQ
        +S Y LQ
Subjt:  LSGYFLQ

Q9XBL8 Rubredoxin7.7e-1845.79Show/hide
Query:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF
        AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   +   +GF +N  YGLG N LT  QK +LI+G+L   F  F
Subjt:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF

Query:  LSGYFLQ
        +S Y LQ
Subjt:  LSGYFLQ

Arabidopsis top hitse value%identityAlignment
AT1G54500.1 Rubredoxin-like superfamily protein3.8e-5266.67Show/hide
Query:  AAARPSSLFALNSIDVSKEDKPTSHEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFF
        A +R  +   L+S D ++E +          +E  +  + RR+EEKFAVLNTGIYECRSCG+K+DE+ GDPSYPI PG  F++LPEDWRCPTCGAA+SFF
Subjt:  AAARPSSLFALNSIDVSKEDKPTSHEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFF

Query:  ESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ
        ESK VEIAGFAQNQQYGLGGNALTSGQK  LI+GSLL FFALFLSGYF+Q
Subjt:  ESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCCCGCCGC
CATCGCGCCATTGCAGAGATCGGCGGCGGCGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACGTCCCACGAGCCAAATCCGC
CGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCCTGTGGGCATAAATTCGACGAG
GCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGAGAGTAA
GAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTATGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGTTCTTCT
TTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA
mRNA sequenceShow/hide mRNA sequence
GCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCCCGCCGC
CATCGCGCCATTGCAGAGATCGGCGGCGGCGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACGTCCCACGAGCCAAATCCGC
CGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCCTGTGGGCATAAATTCGACGAG
GCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGAGAGTAA
GAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTATGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGTTCTTCT
TTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA
Protein sequenceShow/hide protein sequence
AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDE
AVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ