CuGenDBv2

Gene ID	MC08g2340
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	MC08:32246724..32247048
RNA-Seq Expression	MC08g2340
Synteny	MC08g2340
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009236333.1 NADH-plastoquinone oxidoreductase subunit 7 [Gynostemma pentaphyllum]

5.78e-62

89.81

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDRER P+WNDF+YRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

YP_009456118.1 NADH dehydrogenase subunit 7 [Momordica charantia]

1.82e-63

91.67

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDRERSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

YP_009674447.1 NADH dehydrogenase subunit 7 [Siraitia grosvenorii]

2.89e-62

89.81

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTES+KIIQ+A+EGIPGGPYENLEIRCFDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

YP_009752721.1 NADH dehydrogenase subunit H [Ampelosycios humblotii]

2.05e-62

90.74

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

YP_009752975.1 NADH dehydrogenase subunit H [Momordica sessilifolia]

1.82e-63

91.67

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDRERSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

TrEMBL top hits

e value

%identity

Alignment

A0A2I6C035 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.79e-64

91.67

Show/hide

Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDRERSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

A0A515BLN0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.40e-62

89.81

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTES+KIIQ+A+EGIPGGPYENLEIRCFDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

A0A6C0UER3 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.40e-62

89.81

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTES+KIIQ+A+EGIPGGPYENLEIRCFDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

A0A6H0ES80 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.91e-63

90.74

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

A0A6H0EW91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.79e-64

91.67

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRLGEMTESIKIIQ+A+EGIPGGPYENLEIRCFDRERSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

SwissProt top hits

e value

%identity

Alignment

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.2e-49

85.19

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVR+ EMTESIKIIQ+A+EGIPGGPYENLEIRCFDR++ P+WNDFDYRFI KKPSPTFEL KQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
         GFP R +
Subjt:  GGFPRRMR

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-50

87.04

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVR+GEMTESIKIIQ+A+EGIPGGPYENLEIR FDRER+P+WNDFDYRFI KKPSPTFEL KQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
         GFP R +
Subjt:  GGFPRRMR

Q2PMN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.7e-49

83.33

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVR+GEM ESIKIIQ+A+EGIPGGPYENLEIRCFDRE+ P+WN+F+YRFI KKPSPTFEL KQELYVR+EAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
         GFP R +
Subjt:  GGFPRRMR

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.9e-50

87.96

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVRL EMTES+KIIQ+A+EGIPGGPYENLEIR FDR RSP+WNDFDYRFI KKPSPTFELAKQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
        GGFP R +
Subjt:  GGFPRRMR

Q9BBN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.0e-49

84.26

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        DWEVQWQKEGDSL RYLVR+GEM ESIKIIQ+A+EGIPGGPYENLEIRCF RE+ P+WNDF+YRFI KKPSPTFEL KQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
         GFP R +
Subjt:  GGFPRRMR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

5.3e-48

80.56

Show/hide

Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ
        +WE+QWQK+GDSL RYLVRL EMTESIKIIQ+A+EG+PGGPYENLE R FDR+R+P+WNDF+YRFI KKPSPTFEL+KQELYVRVEAPKGEL IFLIGDQ
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFI-KKPSPTFELAKQELYVRVEAPKGELRIFLIGDQ

Query:  GGFPRRMR
         GFP R +
Subjt:  GGFPRRMR

ATMG00510.1 NADH dehydrogenase subunit 7

3.8e-06

27.19

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Query:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWN-------DFDYRFIKKPSPTFELAKQELYVRVEAPKGELRI
        D +V     GD   RY +R+ EM +S++II + +  +P G      I+  DR+  P          +      +  +  F +     Y  VEAPKGE  +
Subjt:  DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWN-------DFDYRFIKKPSPTFELAKQELYVRVEAPKGELRI

Query:  FLIGDQGGFPRRMR
        FL+ +    P R +
Subjt:  FLIGDQGGFPRRMR

Sequences

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CDS sequence

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GATTGGGAAGTTCAGTGGCAAAAAGAAGGAGATTCATTAACTCGTTATTTAGTCAGACTTGGTGAGATGACGGAATCCATAAAAATTATTCAACGAGCTATGGAAGGAAT
TCCAGGGGGGCCCTATGAGAATTTAGAAATACGATGTTTTGATCGAGAAAGGTCTCCGAAATGGAATGACTTTGACTATCGATTCATTAAAAAACCTTCTCCAACTTTTG
AGTTGGCGAAACAAGAACTTTATGTGAGAGTCGAAGCCCCAAAAGGAGAATTGAGAATTTTTTTGATAGGGGATCAGGGTGGTTTTCCTCGGAGAATGCGT

mRNA sequence

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Protein sequence

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DWEVQWQKEGDSLTRYLVRLGEMTESIKIIQRAMEGIPGGPYENLEIRCFDRERSPKWNDFDYRFIKKPSPTFELAKQELYVRVEAPKGELRIFLIGDQGGFPRRMR

MC08g2340 (gene) of Bitter gourd (Dali-11) v1 genome