; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2342 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2342
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionhistone H1-like
Genome locationMC08:32252014..32253456
RNA-Seq ExpressionMC08g2342
SyntenyMC08g2342
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599320.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]5.86e-11284.09Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK  +KSKVVAKPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

XP_022142941.1 histone H1-like [Momordica charantia]1.94e-148100Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

XP_022946127.1 histone H1-like [Cucurbita moschata]1.68e-11183.71Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHK+LPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK+ +KSKVVAKPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

XP_022999095.1 histone H1-like [Cucurbita maxima]3.19e-10982.58Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  A     V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  +KSKVV KPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++ SPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

XP_023521173.1 histone H1-like [Cucurbita pepo subsp. pepo]3.91e-11082.95Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  A       ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  +KSKVVAKPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

TrEMBL top hitse value%identityAlignment
A0A1S3C278 histone H1-like2.85e-10680.67Show/hide
Query:  MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKL
        M+SAADP+V SDAPAA DAA      ND+K KKAA+SKASKAKKPSGAK+ +SSPTHPPF QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKL
Subjt:  MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKL

Query:  LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPK--TISKSKVVAKPKAAAAA
        LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA  PVA KKP SSKLKA AS+KK A V KPKAKTA K KPKAV KPK  T++KSK VAKPK AA  
Subjt:  LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPK--TISKSKVVAKPKAAAAA

Query:  AKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
         K KAA KVK  A K K  A+  KVAKTL++TSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

A0A5D3D4H1 Histone H1-like1.74e-10781.04Show/hide
Query:  MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKL
        M+SAADP+V SDAPAA DAA      ND+K KKAA+SKASKAKKPSGAK+ +SSPTHPPF QMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKL
Subjt:  MASAADPIVPSDAPAA-DAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKL

Query:  LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPK--TISKSKVVAKPKAAAAA
        LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA  PVA KKP SSKLKA AS+KK A V KPKAKTA KPKPKAV KPK  T++KSK VAKPK AA  
Subjt:  LLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAA--PVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPK--TISKSKVVAKPKAAAAA

Query:  AKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
         K KAA KVK  A K K  A+  KVAKTL++TSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AKPKAAAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

A0A6J1CNP7 histone H1-like9.41e-149100Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

A0A6J1G2W2 histone H1-like8.11e-11283.71Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  AA    V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHK+LPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPKAV KPK+ +KSKVVAKPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++TSPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

A0A6J1KEC3 histone H1-like1.55e-10982.58Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
        M+SAADP+  SDAPA  A     V ND+K KKAA+SKASKAKKPSGAKR +SSPTHPPFF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLL

Query:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA
        LVHLKKLVAADKLVKVKNSYKLPSARS  A  AAPV AKKPASSKLKAA SVKK AAV KPKAKTAVKPKPK V KPK  +KSKVV KPKA A A K KA
Subjt:  LVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKA

Query:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
        A KVK  A K KPAA+PAKVAKTL++ SPGK+AAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
Subjt:  AAKVKAAA-KAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

SwissProt top hitse value%identityAlignment
P08283 Histone H14.4e-3246.4Show/hide
Query:  MASAADPIVPSDAPAADAAEVLTVANDAKPKK------AASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPS
        MA+    +     P     E  T+     P+K         +K +K  KP  A +P++  +HP + +MI +AIVSLKE+ GSSQYAI KF EEK KQLP+
Subjt:  MASAADPIVPSDAPAADAAEVLTVANDAKPKK------AASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPS

Query:  NFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVV--------
        NF+KLLL +LKK VA+ KL+KVK S+KL +            AAKKPA +K KA  + K K+     KAK A KPK KAVVKPK  SK+K V        
Subjt:  NFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVV--------

Query:  AKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAK--AKKVAAK--KPKTVKSPARKVQARK
        AKPK  AA  KP  AAK KA  K K   +PAKVAKT  +T+PGK+ A   K  AKKV  K  K K+VKSP +KV  ++
Subjt:  AKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAK--AKKVAAK--KPKTVKSPARKVQARK

P23444 Histone H14.1e-3052.27Show/hide
Query:  ADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHK-QLPSNFRKLLLVH
        A P  P+DAPAA AA+    AN AK KKA             A + ++SPTH P+ +M+SEAI SLKERTGSS YAI KF E+KHK +LP NFRKLL V 
Subjt:  ADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHK-QLPSNFRKLLLVH

Query:  LKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKA-AAAAAKPKAAA
        LKKLVA  KL KVKNSYKL SA     K  A  A KKP +   K  A+ K KA     KAK A KPKP A  KPK + K K  AKPKA  AA AKPK   
Subjt:  LKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKA-AAAAAKPKAAA

Query:  KVKAAAKAKPAARP---AKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK
           A AK KP A+    AK AKT  + +PGK+ APA KA    +KK  T   P RK  +RK KK
Subjt:  KVKAAAKAKPAARP---AKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK

P26569 Histone H1.23.4e-3251.12Show/hide
Query:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK
        D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+
Subjt:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK

Query:  LVAADKLVKVKNSYKLPSARSIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPK-----A
        LVA++KLVKVK S+K+PSARS    K AAPV  K    +K K     K  AAV   KAK A K   K     K ++K+KV AKPKA   AAKPK     A
Subjt:  LVAADKLVKVKNSYKLPSARSIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPK-----A

Query:  AAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK---AKKVAAKKPKTVKSPARKVQARKVKK
         +K KA AAK K   RPAK ++T T+TSPGK+ AAPA K    KK  AK  K VKSPA++   RK KK
Subjt:  AAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK---AKKVAAKKPKTVKSPARKVQARKVKK

P37218 Histone H12.8e-3952.25Show/hide
Query:  DPIVPSDAPAADAAEVLTVANDAKP--KKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVH
        +P++ ++     AA   TV ++A P  K   + K +KAKKP+  ++  ++PTHPP+F+MI +AIV+LKERTGSSQ+AITKF EEK K LPSNF+KLLL  
Subjt:  DPIVPSDAPAADAAEVLTVANDAKP--KKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVH

Query:  LKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKP----------------KTISKSKVVA
        LKK VA++KLVKVKNSYKLPS  S  A AA P A KKPA++K K AA   K  A VKPKAK A K KP A  KP                K  +K+K VA
Subjt:  LKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKP----------------KTISKSKVVA

Query:  KPK-AAAAAAKPKAAAKVKAA-AKAKPAARP--------AKVAKTLTQTSPGKRAAP-AAKAKKVAAKK--PKTVKSPARKVQARKVKK
        K K  AAAAAKPKAA K KAA AK K A +P        AKVAKT T+T+P ++AAP A  AKK   KK   K VKSPA+K   ++ +K
Subjt:  KPK-AAAAAAKPKAAAKVKAA-AKAKPAARP--------AKVAKTLTQTSPGKRAAP-AAKAKKVAAKK--PKTVKSPARKVQARKVKK

Q9M5W4 Histone H17.2e-3553.82Show/hide
Query:  SDAP-AADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPT--HPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK
        +D P +A     +T     +  KAA+ K  K KK    AK+PKS  T  HP FF+MIS+AI +LKERTGSSQYAI KF E+KHKQLPSNFRKLLL HLKK
Subjt:  SDAP-AADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPT--HPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK

Query:  LVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKA
        LVA+ KLVKVKNS+KLPSAR+    A AP  AKKP   K K AA  K      KPKAK  V  K KA    KT++K    AKPK A  A KPK       
Subjt:  LVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKA

Query:  AAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARK
              AA+PAKVAKT    SPGK+       K V  KK KTVKSPA K
Subjt:  AAKAKPAARPAKVAKTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein6.1e-2950Show/hide
Query:  SDAPAADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVA
        +DAP  DAA     A  AK +K  + K  K KK  + A + ++  +HP + +MI +AIV+LKERTGSSQYAI KF EEK K+LP  FRKLLL++LK+LVA
Subjt:  SDAPAADAAEVLTVANDAKPKKAASSKASKAKKP-SGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVA

Query:  ADKLVKVKNSYKLPSARSIQAKAAAP-VAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKAA-
        + KLVKVK S+KLPSA    AKA++P  AA+K A +K K A     KA   K K   A K K    VKPKT +  KV AK KA        AA K KA  
Subjt:  ADKLVKVKNSYKLPSARSIQAKAAAP-VAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKAA-

Query:  AKAKPAARPAKVAKTLTQTSPGKRAAPAAK-------AKKVAAK---KPKTVKSPARKVQARKVKK
        AK K  ARPAK AKT   TSP K+A  A K        KK   K   KPKTVKSPA++  +R VKK
Subjt:  AKAKPAARPAKVAKTLTQTSPGKRAAPAAK-------AKKVAAK---KPKTVKSPARKVQARKVKK

AT2G18050.1 histone H1-32.6e-1141.32Show/hide
Query:  KASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAP
        K   AKKP   ++PK++ THPP+FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  KLVK++ SYKL     +  +    
Subjt:  KASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAP

Query:  VAAK------KPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAA
           K      K  + + +++++  KK   V  + K   K K K   +PK+I  S  V K KA  A+A
Subjt:  VAAK------KPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAA

AT2G18050.2 histone H1-34.2e-0639.44Show/hide
Query:  MISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAK------KPASSKLKAAASVKK
        MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  KLVK++ SYKL     +  +       K      K  + + +++++  K
Subjt:  MISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPSNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKAAAPVAAK------KPASSKLKAAASVKK

Query:  KAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAA
        K   V  + K   K K K   +PK+I  S  V K KA  A+A
Subjt:  KAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein2.4e-3351.12Show/hide
Query:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK
        D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+
Subjt:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK

Query:  LVAADKLVKVKNSYKLPSARSIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPK-----A
        LVA++KLVKVK S+K+PSARS    K AAPV  K    +K K     K  AAV   KAK A K   K     K ++K+KV AKPKA   AAKPK     A
Subjt:  LVAADKLVKVKNSYKLPSARSIQA-KAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPK-----A

Query:  AAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK---AKKVAAKKPKTVKSPARKVQARKVKK
         +K KA AAK K   RPAK ++T T+TSPGK+ AAPA K    KK  AK  K VKSPA++   RK KK
Subjt:  AAKVKA-AAKAKPAARPAKVAKTLTQTSPGKR-AAPAAK---AKKVAAKKPKTVKSPARKVQARKVKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein7.2e-2248.56Show/hide
Query:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK
        D+ AAD    + E    A   K KK  ++KA+K   K +   + K++ +HP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+
Subjt:  DAPAAD----AAEVLTVANDAKPKKAASSKASKAK-KPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKK

Query:  LVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVV-KPKA-KTAVKPKP-KAVVKPKTISKSKVVAKPKAAAAAAKPKAAAK
        LVA++KLVKVK S+K+PSARS    AA P           K AA VKKKA VV KPKA +T+ +  P K V  P      KV    KA A + K K+ AK
Subjt:  LVAADKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVV-KPKA-KTAVKPKP-KAVVKPKTISKSKVVAKPKAAAAAAKPKAAAK

Query:  VKAAAKAK
          +  KAK
Subjt:  VKAAAKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTGCAGATCCGATTGTACCTTCCGACGCGCCGGCCGCCGACGCGGCGGAGGTTCTGACTGTGGCGAACGATGCGAAGCCTAAGAAGGCCGCGTCCTCGAA
AGCTTCCAAGGCTAAGAAACCATCGGGCGCGAAGAGGCCGAAATCTTCACCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAGGCGATTGTATCGCTGAAGGAGAGGA
CAGGCTCGAGTCAGTACGCCATTACGAAGTTCAGTGAAGAGAAGCACAAACAGCTGCCGTCGAATTTCCGGAAGCTCTTGCTTGTTCATCTGAAGAAATTAGTCGCCGCT
GATAAACTTGTTAAGGTGAAGAACTCCTACAAGCTTCCTTCCGCTCGCTCGATTCAGGCGAAAGCCGCAGCGCCTGTCGCTGCCAAGAAGCCAGCTAGTTCAAAGTTGAA
GGCAGCTGCGAGTGTGAAGAAGAAGGCCGCCGTCGTCAAACCGAAGGCTAAAACTGCAGTGAAACCTAAGCCCAAGGCCGTGGTTAAGCCGAAGACGATCTCCAAATCCA
AGGTTGTTGCAAAGCCGAAGGCGGCGGCGGCGGCGGCCAAGCCTAAGGCGGCGGCGAAAGTTAAAGCTGCTGCGAAGGCTAAGCCCGCTGCAAGGCCCGCGAAAGTGGCG
AAAACATTGACGCAAACATCACCGGGAAAGAGAGCTGCACCGGCAGCGAAGGCGAAGAAGGTAGCCGCGAAGAAGCCGAAGACTGTAAAGTCGCCGGCGAGGAAAGTCCA
GGCAAGGAAAGTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
GGCCTTAGGAAGCGAAGTGAAAAACACATCTAAAAATTCCATTTTCAACCTTCAACCTGCCCATCCATATCCCTTCTTAACCCGTACTTTCAATACCGACCGTCGACAAA
TCCCAGATCCAAGGGCTCAAATTCAAATTTTCACGAGGCTCTCGATCCGCGTCAAACGCCTTTCGACCAATCATATCGCAGCAGTCCGATTCCACTTTCGTTATATAAAC
TGCCCTCAACCGTCTCTCTCCTCACCGAATTTTCTCTCTCTAAAATCCCATCGTCCTCTCTCTCTCTCTCTCTCTCTTCCGCATACGTTTCAAGTTCAAGCTTCTGGTTA
ATTGCGATCATGGCTTCCGCTGCAGATCCGATTGTACCTTCCGACGCGCCGGCCGCCGACGCGGCGGAGGTTCTGACTGTGGCGAACGATGCGAAGCCTAAGAAGGCCGC
GTCCTCGAAAGCTTCCAAGGCTAAGAAACCATCGGGCGCGAAGAGGCCGAAATCTTCACCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAGGCGATTGTATCGCTGA
AGGAGAGGACAGGCTCGAGTCAGTACGCCATTACGAAGTTCAGTGAAGAGAAGCACAAACAGCTGCCGTCGAATTTCCGGAAGCTCTTGCTTGTTCATCTGAAGAAATTA
GTCGCCGCTGATAAACTTGTTAAGGTGAAGAACTCCTACAAGCTTCCTTCCGCTCGCTCGATTCAGGCGAAAGCCGCAGCGCCTGTCGCTGCCAAGAAGCCAGCTAGTTC
AAAGTTGAAGGCAGCTGCGAGTGTGAAGAAGAAGGCCGCCGTCGTCAAACCGAAGGCTAAAACTGCAGTGAAACCTAAGCCCAAGGCCGTGGTTAAGCCGAAGACGATCT
CCAAATCCAAGGTTGTTGCAAAGCCGAAGGCGGCGGCGGCGGCGGCCAAGCCTAAGGCGGCGGCGAAAGTTAAAGCTGCTGCGAAGGCTAAGCCCGCTGCAAGGCCCGCG
AAAGTGGCGAAAACATTGACGCAAACATCACCGGGAAAGAGAGCTGCACCGGCAGCGAAGGCGAAGAAGGTAGCCGCGAAGAAGCCGAAGACTGTAAAGTCGCCGGCGAG
GAAAGTCCAGGCAAGGAAAGTCAAGAAATGAACGTAGGTTTGATTGAATTTAGGGTTTGTTACTTACTGATCCTCTCTATCTCTCGTAGCCATGTAAATTAGGGGAAATG
AGATGCAATCGTTGCAATACACTATTTTTATTAATTCAGTTTGATAAATTCAAGGGTTTATCAAATCAATCTTCAGAGAGTGATTTTCGATATGGCTTGAGATTCTGGAA
AATTTGTAGGAATATAAAATGAAGCTTTGG
Protein sequenceShow/hide protein sequence
MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAA
DKLVKVKNSYKLPSARSIQAKAAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKTISKSKVVAKPKAAAAAAKPKAAAKVKAAAKAKPAARPAKVA
KTLTQTSPGKRAAPAAKAKKVAAKKPKTVKSPARKVQARKVKK