; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2345 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2345
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAlba domain-containing protein
Genome locationMC08:32273832..32275840
RNA-Seq ExpressionMC08g2345
SyntenyMC08g2345
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586319.1 hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia]3.16e-6792.48Show/hide
Query:  TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
        TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
Subjt:  TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS

Query:  EKFDSLMTAATAAAPEAAA---EEKKA-EESKE
        EKFDSLMTAAT  A  AA    E+KKA EESKE
Subjt:  EKFDSLMTAATAAAPEAAA---EEKKA-EESKE

XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]3.20e-6890Show/hide
Query:  ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ
        LGKSEKFDSLMTAATA      A   AA EEKKAEESKE+
Subjt:  LGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]6.24e-6888.65Show/hide
Query:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ
        VLGKSEKFDSLMTAATA      A   A  EEKKAEE+KE+
Subjt:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ

XP_022143158.1 uncharacterized protein At2g34160 [Momordica charantia]9.06e-80100Show/hide
Query:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ
        KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ
Subjt:  KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]2.25e-6888.89Show/hide
Query:  MATIAVSGA--TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MATIAVSGA  TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATIAVSGA--TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAAAPE----------AAAEEKKAEESKEQ
        LGKSEKFDSLMTAATA  PE          AA EEKKAEE+KEQ
Subjt:  LGKSEKFDSLMTAATAAAPE----------AAAEEKKAEESKEQ

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein1.55e-6890Show/hide
Query:  ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ
        LGKSEKFDSLMTAATA      A   AA EEKKAEESKE+
Subjt:  LGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ

A0A1S3C2U1 uncharacterized protein At2g341603.02e-6888.65Show/hide
Query:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ
        VLGKSEKFDSLMTAATA      A   A  EEKKAEE+KE+
Subjt:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein3.02e-6888.65Show/hide
Query:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ
        VLGKSEKFDSLMTAATA      A   A  EEKKAEE+KE+
Subjt:  VLGKSEKFDSLMTAATA------AAPEAAAEEKKAEESKEQ

A0A6J1CQ10 uncharacterized protein At2g341604.39e-80100Show/hide
Query:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ
        KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ
Subjt:  KSEKFDSLMTAATAAAPEAAAEEKKAEESKEQPEQ

A0A6J1HLL6 uncharacterized protein At2g34160-like4.83e-6792.48Show/hide
Query:  TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
        TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
Subjt:  TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS

Query:  EKFDSLMTAATAAAPEAAA---EEKKA-EESKE
        EKFDSLMTAAT AA   A    E+KKA EESKE
Subjt:  EKFDSLMTAATAAAPEAAA---EEKKA-EESKE

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.0e-3773.68Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAAPEAAAE
        M AA     +A A+
Subjt:  MTAATAAAPEAAAE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.7e-4071.77Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAAPEAAAEEKKAEESKEQ
        M AA         EEK+A E++EQ
Subjt:  MTAATAAAPEAAAEEKKAEESKEQ

AT2G34160.1 Alba DNA/RNA-binding protein7.4e-3973.68Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAAPEAAAE
        M AA     +A A+
Subjt:  MTAATAAAPEAAAE

AT3G04620.1 Alba DNA/RNA-binding protein4.1e-4575.37Show/hide
Query:  ATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK
        AT   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  ATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTAAT---AAAPEAAAEEKKAEESKEQ
        S+KFDSL+   T       EA+AE + + E++E+
Subjt:  SEKFDSLMTAAT---AAAPEAAAEEKKAEESKEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCAAACACCAAGAAACCACTATTCTTCTACGTTAACCTCGCTAAGAGGTA
TATTCAACAGCACAATGAGGTTGAGCTTTCTGCCCTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAAAG
TTTTGACTTCTACAGTTGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACT
GCGGCCACAGCTGCTGCGCCAGAGGCAGCTGCTGAAGAGAAAAAGGCAGAGGAAAGCAAGGAGCAGCCGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
CAATGAACTAACTTCCATTTCTCCATCCAATCAAAGGCTGCCACGTTTCACCTTCCCGCTCTCCCGCCCTATAAAATCCATCTTCTTAACGACTTCCAGCTAGTTTTCCG
AGCCCCAACCCCTTCCAATTTTTCCCGCTCCTGAGATTTTCCCGAGAAAATTGCCAGAGAAAATTTTCTGTTTGAGCAGGGAGAGAGAGAGAGAGTAGAAACAGCGAGGT
GTGAAATCAAGGAATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCAAACACCAAGAAACCACTATTCTTCTACGTTAACC
TCGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCCCTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCT
ACAGAGAAGAAAGTTTTGACTTCTACAGTTGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGA
TTCTCTGATGACTGCGGCCACAGCTGCTGCGCCAGAGGCAGCTGCTGAAGAGAAAAAGGCAGAGGAAAGCAAGGAGCAGCCGGAGCAGTAGGGGGAGGAGAGGGGACATT
TTGAAGATGTTACATTGTTGTAGTTTAAGAATATCACAAATGCAATATTATAGGATAGGGGATTTTGATTTTGAATTGCTCTCTTTTCTAGTTTCTTTTTTTTGGGACAG
TTACAGTTTTCAATGAGATGCCATGCCATCACCAAAAAGACAAAGAAAAAAAAAAAAAAACCTTTCTTCTCTATCAAGTGTGTGTTGAGAAGGGAGCCTACTGTCTGTGT
TTGCATTTGTTAGCTTCATGGTGATCTAATGAACTGATAAAAGGATGCCTCATCTTGAATTTTCTTTTCTAATCTTCATTCTC
Protein sequenceShow/hide protein sequence
MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
AATAAAPEAAAEEKKAEESKEQPEQ