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MC08g2354 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2354
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionVQ domain-containing protein
Genome locationMC08:32393596..32393901
RNA-Seq ExpressionMC08g2354
SyntenyMC08g2354
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3969566.1 hypothetical protein CMV_006646 [Castanea mollissima]1.46e-1162.5Show/hide
Query:  GKCGEMNQYKNH-SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISP
        GK    N Y+N   +S ++TKV+RKP+KVKYISSP+MVKA N  +FRAIVQQLTG N+D  ISP
Subjt:  GKCGEMNQYKNH-SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISP

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]4.41e-3160.19Show/hide
Query:  MGKCGEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP-ATRAPSSTLL-----LEAIGVPDDRSSL
        MGKCGE N++K+  QSQN TKVQRKPIKVKYISSPMM+KASNA +FRAIVQQLTGF S +    +NH+PPP A + PS++ L     +EA+ + D+ SSL
Subjt:  MGKCGEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP-ATRAPSSTLL-----LEAIGVPDDRSSL

Query:  LHLDEGGC
        L  D+  C
Subjt:  LHLDEGGC

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]9.04e-2354.62Show/hide
Query:  MGKCGEMNQYKNH------SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP----ATRAPSSTLL-----LEAI
        MGKCGE NQY NH      SQ+QN TKVQRKPIKVKYISSPMM+KASNA++FRAIVQQLTGF+S+   +PT  R         R PS+        +E +
Subjt:  MGKCGEMNQYKNH------SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP----ATRAPSSTLL-----LEAI

Query:  GVPDDR--SSLLHLDEGGC
           DD    SLL  D  GC
Subjt:  GVPDDR--SSLLHLDEGGC

XP_011468362.1 PREDICTED: uncharacterized protein LOC105352572 [Fragaria vesca subsp. vesca]5.96e-1157.38Show/hide
Query:  MNQYKNHSQSQNTTKVQRK-----PIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATI
        M Q +NH   Q  T+ +++     PI++KYISSPMMV+A+NA +FRAIVQ+LTG NSDATI
Subjt:  MNQYKNHSQSQNTTKVQRK-----PIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATI

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]1.48e-1163.64Show/hide
Query:  GEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD
        G++  ++ H  S+N TK ++ PIK+KYISSPMMVKASNA +FRAIVQ+LTG NSD
Subjt:  GEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD

TrEMBL top hitse value%identityAlignment
A0A067DJ56 VQ domain-containing protein1.21e-1057.38Show/hide
Query:  MGKCGEMNQYKNHSQSQNT--TKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD
        MGK G    ++ H++SQ +   KV++ P+KV YISSPM VKASNA +FRAIVQ+LTG NS+
Subjt:  MGKCGEMNQYKNHSQSQNT--TKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD

A0A0A0LIA7 VQ domain-containing protein4.38e-2354.62Show/hide
Query:  MGKCGEMNQYKNH------SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP----ATRAPSSTLL-----LEAI
        MGKCGE NQY NH      SQ+QN TKVQRKPIKVKYISSPMM+KASNA++FRAIVQQLTGF+S+   +PT  R         R PS+        +E +
Subjt:  MGKCGEMNQYKNH------SQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPP----ATRAPSSTLL-----LEAI

Query:  GVPDDR--SSLLHLDEGGC
           DD    SLL  D  GC
Subjt:  GVPDDR--SSLLHLDEGGC

A0A2H5QH96 VQ domain-containing protein1.21e-1057.38Show/hide
Query:  MGKCGEMNQYKNHSQSQNT--TKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD
        MGK G    ++ H++SQ +   KV++ P+KV YISSPM VKASNA +FRAIVQ+LTG NS+
Subjt:  MGKCGEMNQYKNHSQSQNT--TKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD

A0A5D2MMS7 VQ domain-containing protein1.00e-1052.94Show/hide
Query:  SQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPPATRAPSSTLLLEAIGVPDDRSSLLHLDEG
        S+N  K+   PIKVKYISSPMMVKASNA +FRAIVQ+LTG +SD    P N              LL+A   PDD SS+   DEG
Subjt:  SQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPPATRAPSSTLLLEAIGVPDDRSSLLHLDEG

A0A6J1A533 uncharacterized protein LOC1104149907.16e-1263.64Show/hide
Query:  GEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD
        G++  ++ H  S+N TK ++ PIK+KYISSPMMVKASNA +FRAIVQ+LTG NSD
Subjt:  GEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTGTGGAGAGATGAACCAATACAAGAATCATAGCCAGAGCCAAAACACAACCAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGCCCAATGAT
GGTGAAAGCAAGCAATGCAATGGACTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCAACTCCGACGCCACGATTTCTCCGACGAACCACCGACCACCTCCCGCCACCC
GAGCTCCGTCTTCAACGTTGCTTTTGGAAGCTATCGGAGTCCCAGACGACAGGTCGTCGTTGCTCCATCTAGATGAAGGTGGTTGT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTGTGGAGAGATGAACCAATACAAGAATCATAGCCAGAGCCAAAACACAACCAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGCCCAATGAT
GGTGAAAGCAAGCAATGCAATGGACTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCAACTCCGACGCCACGATTTCTCCGACGAACCACCGACCACCTCCCGCCACCC
GAGCTCCGTCTTCAACGTTGCTTTTGGAAGCTATCGGAGTCCCAGACGACAGGTCGTCGTTGCTCCATCTAGATGAAGGTGGTTGT
Protein sequenceShow/hide protein sequence
MGKCGEMNQYKNHSQSQNTTKVQRKPIKVKYISSPMMVKASNAMDFRAIVQQLTGFNSDATISPTNHRPPPATRAPSSTLLLEAIGVPDDRSSLLHLDEGGC