; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2363 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2363
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionB3 domain-containing protein At2g31720-like
Genome locationMC08:32467970..32468596
RNA-Seq ExpressionMC08g2363
SyntenyMC08g2363
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599340.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.39e-4353.71Show/hide
Query:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL
        N DDP A     +VN   P AEI    +P    +N  DP  E+ P A     + E+PA MREHI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +
Subjt:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL

Query:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        R EF+TA EE+ L  R  +G+  LNYIDT I+G DL+ + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

XP_022946870.1 B3 domain-containing protein At2g31720-like [Cucurbita moschata]6.17e-4554.29Show/hide
Query:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL
        N DDP A     +VNG  P AEI    +P    +N  DP  E+ P A     + E+PA MREHI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +
Subjt:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL

Query:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        R EF+TA EE+ L  R  +G+  LNYIDT I+G DL+ + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

XP_022998957.1 B3 domain-containing protein At2g31720-like [Cucurbita maxima]6.97e-4457.24Show/hide
Query:  MVNGGDPGAELPAAGGNGGDP----------EIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETA
        +VNG  P AE+P    N  DP          E+PA MREHI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +R EF+TA EE+ L  R  +G+  
Subjt:  MVNGGDPGAELPAAGGNGGDP----------EIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETA

Query:  LNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        LNYIDT I+G DLR + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  LNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

XP_023545398.1 B3 domain-containing protein At2g31720-like [Cucurbita pepo subsp. pepo]9.85e-4453.71Show/hide
Query:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL
        N  DP A     +VNG  P AE  N  +P    +N  DP  E+ P A     + E+PA MR+HI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +
Subjt:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL

Query:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        R EF+TA EE+ L  R  +GE  LNYIDT I+G DL+ + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

XP_038874960.1 B3 domain-containing protein At2g31420-like [Benincasa hispida]8.65e-2545.45Show/hide
Query:  PEIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN
        PEIPAAMR+ I+ MGGYGI L+I+K L  TDL  +QGRLSLP +KL  +F T  E++ L +R  + +  +N    +I+     E +I  KKW+IG+    
Subjt:  PEIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN

Query:  CLMNKWNSFARAHHLKAGNTV
        CLM +WN+FA    LK+G  +
Subjt:  CLMNKWNSFARAHHLKAGNTV

TrEMBL top hitse value%identityAlignment
A0A5A7VFT2 B3 domain-containing protein5.52e-2444Show/hide
Query:  EIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETAL-----NYIDTIILGPDLRESAIRFKKWRIGA
        E+PAAMRE I+  GGY IQL+IEK L  +D+  + GRL LP  KL+GEF    E R L    G  +  +     N ++  I+  DLRES++  KKW+IG+
Subjt:  EIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETAL-----NYIDTIILGPDLRESAIRFKKWRIGA

Query:  KYANCLMNKWNSFARAHHLKAGNTV
            CL+  WNSF   + LK+G+ V
Subjt:  KYANCLMNKWNSFARAHHLKAGNTV

A0A6J1CSV9 B3 domain-containing protein At2g31420-like9.85e-2543.33Show/hide
Query:  EIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANC
        E+PA +R+ I  +GGY IQ++I+K L  TDL  + GRLS+P KKL  +F T  EE+ L+ +  E +   N +  +IL P LRES I  KKW+IG++   C
Subjt:  EIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANC

Query:  LMNKWNSFARAHHLKAGNTV
        L+++WNS A+ + L++G+ +
Subjt:  LMNKWNSFARAHHLKAGNTV

A0A6J1CX35 putative B3 domain-containing protein At2g274104.60e-2545.45Show/hide
Query:  PEIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN
        PE+PAAMR+ I+ +GGYGIQL+I+K L  TD+  + GRLSLP KKLR       EER L+ +          +D  I+ PDL+E  I  KKW+IG+    
Subjt:  PEIPAAMREHIIGMGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN

Query:  CLMNKWNSFARAHHLKAGNTV
        CLM +WNSF     L++G+ +
Subjt:  CLMNKWNSFARAHHLKAGNTV

A0A6J1G587 B3 domain-containing protein At2g31720-like2.99e-4554.29Show/hide
Query:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL
        N DDP A     +VNG  P AEI    +P    +N  DP  E+ P A     + E+PA MREHI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +
Subjt:  NADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAEL-PAAGGNGGDPEIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKL

Query:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        R EF+TA EE+ L  R  +G+  LNYIDT I+G DL+ + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  RGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

A0A6J1K9G9 B3 domain-containing protein At2g31720-like3.37e-4457.24Show/hide
Query:  MVNGGDPGAELPAAGGNGGDP----------EIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETA
        +VNG  P AE+P    N  DP          E+PA MREHI   MGGY +Q+IIEK LTATD+RT+QGRLSLP K +R EF+TA EE+ L  R  +G+  
Subjt:  MVNGGDPGAELPAAGGNGGDP----------EIPAAMREHIIG-MGGYGIQLIIEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETA

Query:  LNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV
        LNYIDT I+G DLR + IRFKKW +G  Y NCL+NKWNSFARA+ LK G  V
Subjt:  LNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV

SwissProt top hitse value%identityAlignment
Q9SCJ8 Putative B3 domain-containing protein At3g496102.5e-0633.04Show/hide
Query:  IQLIIEKVLTATDLRTDQGRLSLP-PKKLRGEFLTAAEERFLV--RRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN------CLMNKWNSF
        I+LI EK LTATD++  + RL +P  K LR +FLT  E R +   +   E +T    + TII+    +E ++RF  W +  K +        L   WN  
Subjt:  IQLIIEKVLTATDLRTDQGRLSLP-PKKLRGEFLTAAEERFLV--RRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN------CLMNKWNSF

Query:  ARAHHLKAGNTV
           + LKA + +
Subjt:  ARAHHLKAGNTV

Arabidopsis top hitse value%identityAlignment
AT2G27410.1 Domain of unknown function (DUF313)1.8e-0425.77Show/hide
Query:  GYGIQLIIEKVLTATDLRTDQGRLSLPPKKLR-GEFLTAAEERFL---VRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNS
        GY  +LI  + L  TDL+  + RLS+P K+++  +FLT  E R +     +  +    +N++D     P+L +  +  +KW++   +    +  W +
Subjt:  GYGIQLIIEKVLTATDLRTDQGRLSLPPKKLR-GEFLTAAEERFL---VRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNS

AT2G31420.1 Domain of unknown function (DUF313)2.4e-0428.87Show/hide
Query:  DDPGAAMVNGGDPGAELPAAGGNGGDPEIPAAMREHIIGMGGYGIQLIIE-KVLTATDLRTDQGRLSLPPKKL-RGEFLTAAEERFL------VRRGGEG
        D P  +  N  D  +  PA      +  IP  + + +    GY  +LII+ +VL  TDLR +QG LS+   KL + +FLT  E RFL       +R G  
Subjt:  DDPGAAMVNGGDPGAELPAAGGNGGDPEIPAAMREHIIGMGGYGIQLIIE-KVLTATDLRTDQGRLSLPPKKL-RGEFLTAAEERFL------VRRGGEG

Query:  ETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNS
              +   ++ P+  +  +  KKW     +   L + WN+
Subjt:  ETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNS

AT3G49610.1 Domain of unknown function (DUF313)1.8e-0733.04Show/hide
Query:  IQLIIEKVLTATDLRTDQGRLSLP-PKKLRGEFLTAAEERFLV--RRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN------CLMNKWNSF
        I+LI EK LTATD++  + RL +P  K LR +FLT  E R +   +   E +T    + TII+    +E ++RF  W +  K +        L   WN  
Subjt:  IQLIIEKVLTATDLRTDQGRLSLP-PKKLRGEFLTAAEERFLV--RRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYAN------CLMNKWNSF

Query:  ARAHHLKAGNTV
           + LKA + +
Subjt:  ARAHHLKAGNTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGTAAACGGCGGCGACCCAGGCGCTGAAATTGCAAACGGCGATGACCCAGGTGCGGCGGAGGCGGTGGCAATGGTGAACGGCGGCGACCCAGGCGCTGAAATTGCAAA
CGCCGATGACCCAGGTGCGGCGGAGGCGGTGGCAATGGTGAACGGCGGCGACCCAGGCGCTGAAATTGCAAACGCCGATGACCCAGGTGCGGCGATGGTGAATGGCGGCG
ACCCAGGTGCGGAATTGCCGGCGGCGGGGGGGAATGGCGGTGACCCAGAAATACCGGCGGCGATGAGAGAGCATATAATAGGGATGGGGGGGTACGGAATACAACTGATA
ATCGAGAAGGTGTTGACGGCGACGGACTTGAGGACGGATCAGGGGCGGCTGTCGCTGCCGCCGAAGAAGCTGCGGGGGGAGTTTCTGACGGCGGCGGAGGAGAGGTTTCT
GGTGCGGCGCGGCGGCGAGGGGGAGACGGCGCTGAACTACATAGACACCATAATTTTGGGGCCGGATCTAAGAGAGAGCGCAATCCGGTTCAAGAAGTGGCGAATTGGGG
CAAAATACGCCAATTGTTTGATGAATAAATGGAACTCATTTGCCAGAGCTCACCACCTGAAGGCCGGAAACACTGTG
mRNA sequenceShow/hide mRNA sequence
ATTGTAAACGGCGGCGACCCAGGCGCTGAAATTGCAAACGGCGATGACCCAGGTGCGGCGGAGGCGGTGGCAATGGTGAACGGCGGCGACCCAGGCGCTGAAATTGCAAA
CGCCGATGACCCAGGTGCGGCGGAGGCGGTGGCAATGGTGAACGGCGGCGACCCAGGCGCTGAAATTGCAAACGCCGATGACCCAGGTGCGGCGATGGTGAATGGCGGCG
ACCCAGGTGCGGAATTGCCGGCGGCGGGGGGGAATGGCGGTGACCCAGAAATACCGGCGGCGATGAGAGAGCATATAATAGGGATGGGGGGGTACGGAATACAACTGATA
ATCGAGAAGGTGTTGACGGCGACGGACTTGAGGACGGATCAGGGGCGGCTGTCGCTGCCGCCGAAGAAGCTGCGGGGGGAGTTTCTGACGGCGGCGGAGGAGAGGTTTCT
GGTGCGGCGCGGCGGCGAGGGGGAGACGGCGCTGAACTACATAGACACCATAATTTTGGGGCCGGATCTAAGAGAGAGCGCAATCCGGTTCAAGAAGTGGCGAATTGGGG
CAAAATACGCCAATTGTTTGATGAATAAATGGAACTCATTTGCCAGAGCTCACCACCTGAAGGCCGGAAACACTGTG
Protein sequenceShow/hide protein sequence
IVNGGDPGAEIANGDDPGAAEAVAMVNGGDPGAEIANADDPGAAEAVAMVNGGDPGAEIANADDPGAAMVNGGDPGAELPAAGGNGGDPEIPAAMREHIIGMGGYGIQLI
IEKVLTATDLRTDQGRLSLPPKKLRGEFLTAAEERFLVRRGGEGETALNYIDTIILGPDLRESAIRFKKWRIGAKYANCLMNKWNSFARAHHLKAGNTV