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MC08g2398 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2398
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC08:32839687..32839896
RNA-Seq ExpressionMC08g2398
SyntenyMC08g2398
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573816.1 hypothetical protein SDJN03_27703, partial [Cucurbita argyrosperma subsp. sororia]2.79e-0746.15Show/hide
Query:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
        LL + I +++F     +F  FQMV QWPPA C T    C TA  +    FTIHG WPS  +GD+V
Subjt:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
XP_022143193.1 ribonuclease MC-like [Momordica charantia]3.12e-43100Show/hide
Query:  IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
Subjt:  IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
XP_023522327.1 ribonuclease MC-like [Cucurbita pepo subsp. pepo]2.59e-0860.47Show/hide
Query:  ANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPS
        A F++FQMVQQWPPA CA FP     A + + TRFTIHG WP+
Subjt:  ANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPS
XP_023541880.1 ribonuclease S-6-like isoform X2 [Cucurbita pepo subsp. pepo]5.28e-0746.15Show/hide
Query:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
        LL + I +++F     +F  FQMV QWPPA C T    C TA  +    FTIHG WPS  +GD+V
Subjt:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
XP_042483875.1 extracellular ribonuclease LE-like [Macadamia integrifolia]4.75e-0738.18Show/hide
Query:  GGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        G  +F  F +VQQWP +YC T  + C     +  T F IHG WP+ ++G   ++C
Subjt:  GGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
TrEMBL top hitse value%identityAlignment
A0A2K3LVC8 Ribonuclease T(2)9.90e-0740.38Show/hide
Query:  NFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        +F  F  VQQWP AYC T  + C     + T  F IHG WP+ ++G   ++C
Subjt:  NFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
A0A392NJP3 Ribonuclease T(2) (Fragment)8.85e-0740.38Show/hide
Query:  NFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        +F  F  VQQWP AYC T  + C     + T  F IHG WP+ ++G   ++C
Subjt:  NFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
A0A6J1CQ41 ribonuclease MC-like1.51e-43100Show/hide
Query:  IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
Subjt:  IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
A0A6J1FZP3 Ribonuclease T(2)3.38e-0746.15Show/hide
Query:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
        LL + I +++F     +F  FQMV QWPPA C T    C TA  +    FTIHG WPS  +GD+V
Subjt:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
A0A6J1FZQ4 Ribonuclease T(2)4.42e-0746.15Show/hide
Query:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
        LL + I +++F     +F  FQMV QWPPA C T    C TA  +    FTIHG WPS  +GD+V
Subjt:  LLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14220.1 Ribonuclease T2 family protein2.5e-0633.33Show/hide
Query:  LNVIIMMMVFGG-----GGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
        +NV++ ++VF G        +F  F  V QWP AYC T    C     +    F IHG WP+ + G   ++C
Subjt:  LNVIIMMMVFGG-----GGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC
AT2G39780.1 ribonuclease 22.3e-0434.55Show/hide
Query:  FQMFQMVQQWPPAYCATFPNDCNTAL----AQATTRFTIHGYWPSLDNGDLVTHC
        F  F +  QWP  YC    + C+       + A T+FTIHG WP  ++G   + C
Subjt:  FQMFQMVQQWPPAYCATFPNDCNTAL----AQATTRFTIHGYWPSLDNGDLVTHC
AT2G39780.2 ribonuclease 22.3e-0434.55Show/hide
Query:  FQMFQMVQQWPPAYCATFPNDCNTAL----AQATTRFTIHGYWPSLDNGDLVTHC
        F  F +  QWP  YC    + C+       + A T+FTIHG WP  ++G   + C
Subjt:  FQMFQMVQQWPPAYCATFPNDCNTAL----AQATTRFTIHGYWPSLDNGDLVTHC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAGTGTTATTGAATGTAATAATAATGATGATGGTGTTTGGAGGAGGGGGAGCCAACTTCCAAATGTTCCAAATGGTGCAGCAGTGGCCACCGGCTTATTGCGCTACCTT
CCCAAACGACTGCAACACAGCCCTGGCTCAGGCCACCACCAGGTTCACAATACATGGCTACTGGCCCAGTCTAGACAATGGAGACCTGGTAACTCACTGT
mRNA sequenceShow/hide mRNA sequence
ATAGTGTTATTGAATGTAATAATAATGATGATGGTGTTTGGAGGAGGGGGAGCCAACTTCCAAATGTTCCAAATGGTGCAGCAGTGGCCACCGGCTTATTGCGCTACCTT
CCCAAACGACTGCAACACAGCCCTGGCTCAGGCCACCACCAGGTTCACAATACATGGCTACTGGCCCAGTCTAGACAATGGAGACCTGGTAACTCACTGT
Protein sequenceShow/hide protein sequence
IVLLNVIIMMMVFGGGGANFQMFQMVQQWPPAYCATFPNDCNTALAQATTRFTIHGYWPSLDNGDLVTHC