; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2455 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2455
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAlba domain-containing protein
Genome locationMC08:33358849..33361053
RNA-Seq ExpressionMC08g2455
SyntenyMC08g2455
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]8.47e-7490.84Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL +EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERG+ G+ DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]7.25e-7592.37Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

XP_022143001.1 uncharacterized protein At2g34160-like [Momordica charantia]1.72e-82100Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERGDTGDTDEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

XP_022946216.1 uncharacterized protein At2g34160-like [Cucurbita moschata]5.96e-7491.6Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEER +TGD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

XP_023547053.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]5.96e-7491.6Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEER +TGD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like3.51e-7592.37Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein3.51e-7592.37Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like8.33e-83100Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEERGDTGDTDEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

A0A6J1G312 uncharacterized protein At2g34160-like2.89e-7491.6Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EILLGKTENFDELMAAAAEER +TGD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like1.18e-7390.84Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NLG D YKKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGL VEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EI LGKTENFDELMAAAAEER +TGD DEQS
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.2e-4882.11Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG  VEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGD
        EI L K+E FDELMAAA EE+ D
Subjt:  EILLGKTENFDELMAAAAEERGD

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein2.6e-4979.39Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI EGVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG  VEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGDTGDTDEQS
        EI L K+E FDELMAAA EE+ +  +  EQ+
Subjt:  EILLGKTENFDELMAAAAEERGDTGDTDEQS

AT2G34160.1 Alba DNA/RNA-binding protein1.5e-4982.11Show/hide
Query:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++NL  D  KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG  VEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGD
        EI L K+E FDELMAAA EE+ D
Subjt:  EILLGKTENFDELMAAAAEERGD

AT3G04620.1 Alba DNA/RNA-binding protein3.0e-3777.32Show/hide
Query:  YKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELM
        +KKNRIQVSNTKKPLFFYVNLAKRY+QQHNEVELSALGMAI TVVT++EILKNNGL  EKK+ TSTV +KD+++G+ VQKAKIEI+LGK++ FD L+
Subjt:  YKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTGGAAGGTGTGAACTCCCTGAATTTGGGTCCCGATGGGTATAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCATTGTTCTTCTATGTCAA
TCTCGCTAAGAGGTACATGCAGCAGCATAATGAGGTCGAACTTTCTGCTCTTGGAATGGCAATTGCCACTGTTGTTACTGTTGCCGAAATTTTGAAAAACAATGGATTGG
TTGTTGAGAAGAAGATTGCAACTTCAACTGTTGATATCAAGGATGACTCAAGAGGTCGACCTGTCCAAAAGGCCAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTT
GACGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGGGACACAGGCGATACTGATGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGGAATGAAGGTTATAAAAATATAACTAATATGAGGTTTGAATTCGTTATAAATCAAAATCAGGAATAATTATTTAGAATGAAAAAATATTTAAAAAAAAATGG
AAAAGACGGAATGGAAAGAAAAACAAAAACACAAAAGAAAAGGAGAGAAGGGTATTATTGTACTTTCACATACACGTCAAATCAAGAAATGTTATTAGACGAAGTATTCG
AACCAAAGCTTATAACTCAGCCTTTGACCTCAGCAACCGAAAAACTAGGGTTTTGAGTTACAGTTTCTTAGGGTTTTTTGCGAGGTTGAGCAGCTCAATGGAAGAAATTG
TGGAAGGTGTGAACTCCCTGAATTTGGGTCCCGATGGGTATAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCATTGTTCTTCTATGTCAATCTCGCTAAGAGG
TACATGCAGCAGCATAATGAGGTCGAACTTTCTGCTCTTGGAATGGCAATTGCCACTGTTGTTACTGTTGCCGAAATTTTGAAAAACAATGGATTGGTTGTTGAGAAGAA
GATTGCAACTTCAACTGTTGATATCAAGGATGACTCAAGAGGTCGACCTGTCCAAAAGGCCAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTTGACGAATTGATGG
CAGCTGCTGCTGAGGAAAGGGGGGACACAGGCGATACTGATGAGCAGAGTTAAAGATGAAATACATTTGATGTATCTTGTCTTTTAGTTACAATTTTTGTTTGTGATGAA
CCGAATTTTCCATTAATTATTCGTAGCTCTCTAGGTACTCGAGGAGTCGAGGCACTAATTTTCATAGTGAGTTTGTTCATAATTTCATTTTAGGGATCTTCATAATTTAT
TTGGAGTTTTTCCATATAGAAAGCCATTATTTTTTATTCTGATATTTTGTCTTCC
Protein sequenceShow/hide protein sequence
MEEIVEGVNSLNLGPDGYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLVVEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENF
DELMAAAAEERGDTGDTDEQS