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MC08g2462 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2462
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationMC08:33417095..33417858
RNA-Seq ExpressionMC08g2462
SyntenyMC08g2462
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139322.1 zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus]1.70e-8181.4Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+ +   H      +LAGDWYCNCGAHNYASRS+CY+CNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFG
        WIC+RIGCE HNYASRMECYKC  PR FG
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFG

XP_008457786.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]3.58e-8382.95Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+ +   H      +LAGDWYCNCGAHNYASRS+CYRCNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFG
        WIC+RIGCE HNYASRMECYKC TPRDFG
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFG

XP_022143171.1 uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia]5.07e-103100Show/hide
Query:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
        MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
Subjt:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI

Query:  CTRIGCEMHNYASRMECYKCNTPRDFG
        CTRIGCEMHNYASRMECYKCNTPRDFG
Subjt:  CTRIGCEMHNYASRMECYKCNTPRDFG

XP_022966014.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]4.41e-8285.6Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE++KT+   +LAGDWYC+CGAHNYASRS+CYRCN  A+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFG
        RIGCE HNYASRMECYKC TPRDFG
Subjt:  RIGCEMHNYASRMECYKCNTPRDFG

XP_023538268.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]1.80e-8184.8Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE++KT+   +LAGDWYC+CGAHNYASRS+CYRCN  A+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFG
        RIGCE HNYASRMECYKC TPRDFG
Subjt:  RIGCEMHNYASRMECYKCNTPRDFG

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein1.12e-8181.4Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+ +   H      +LAGDWYCNCGAHNYASRS+CY+CNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFG
        WIC+RIGCE HNYASRMECYKC  PR FG
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFG

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c1.73e-8382.95Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+ +   H      +LAGDWYCNCGAHNYASRS+CYRCNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQA----LLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFG
        WIC+RIGCE HNYASRMECYKC TPRDFG
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFG

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like2.45e-103100Show/hide
Query:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
        MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
Subjt:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI

Query:  CTRIGCEMHNYASRMECYKCNTPRDFG
        CTRIGCEMHNYASRMECYKCNTPRDFG
Subjt:  CTRIGCEMHNYASRMECYKCNTPRDFG

A0A6J1FCS1 zinc finger Ran-binding domain-containing protein 2-like1.19e-7983.2Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE++KT+   +LAGDWYC+CGAHNYASRS+CYRCN  A+K+ D I ALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFG
        RIGCE HNYASRMECYKC TPR+FG
Subjt:  RIGCEMHNYASRMECYKCNTPRDFG

A0A6J1HSH3 zinc finger Ran-binding domain-containing protein 2-like2.13e-8285.6Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE++KT+   +LAGDWYC+CGAHNYASRS+CYRCN  A+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFG
        RIGCE HNYASRMECYKC TPRDFG
Subjt:  RIGCEMHNYASRMECYKCNTPRDFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein1.4e-1030.17Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC-NCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEM
        GDW+C  C  +NF + ++C +C   K  GP  T+      +   +  GDW C  CG  N+AS   C  C     K +         + GDW C    C+ 
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC-NCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEM

Query:  HNYASRMECYKCNTPR
         N+     C KC   R
Subjt:  HNYASRMECYKCNTPR

AT2G17975.1 zinc finger (Ran-binding) family protein4.5e-1425.36Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY------------HKTDHQALLAGDWYCNCGAHNYASRSNCYRC
        GDW+C  C + N+  RE C++CG  K                    Y    P +++               + H+   +GDW C CG HNY+SR  C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY------------HKTDHQALLAGDWYCNCGAHNYASRSNCYRC

Query:  NSNA--------------------------------------------------------FKNVDNIGALPG-----WKSGDWICTRIGCEMHNYASRME
        N  A                                                        F    +  AL G     W+ GDW+CT   C+ HNYASR E
Subjt:  NSNA--------------------------------------------------------FKNVDNIGALPG-----WKSGDWICTRIGCEMHNYASRME

Query:  CYKCNTPRD
        C +C T RD
Subjt:  CYKCNTPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein6.9e-4755Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRC--------------NSNAFKNVDN
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY Y++T+   ++AGDWYC   NCG+HNYASR++CYRC                 A+ N D 
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRC--------------NSNAFKNVDN

Query:  IGALPGWKSGDWICTRIGCEMHNYASRMECYKCNTPRDFG
            PGWK+GDW+C R+GC +HNYASR EC+KC T RD+G
Subjt:  IGALPGWKSGDWICTRIGCEMHNYASRMECYKCNTPRDFG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein4.1e-3141.14Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRCNSNAFKNVDNIGA---
        GDW C  C H+NF++R++CQRCG             +  +GG   + + +  T    +  GDWYC   NCG HN+ASRS C++C +  FK+    G    
Subjt:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRCNSNAFKNVDNIGA---

Query:  ----------------LPG------WKSGDWICTRIGCEMHNYASRMECYKCNTPRDF
                        +PG      WKSGDWICTRIGC  HN+ASRMEC++CN PRDF
Subjt:  ----------------LPG------WKSGDWICTRIGCEMHNYASRMECYKCNTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein8.0e-2735.62Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPD----------PTTYEYHKTDHQALLAGDWYCN---CGAHNYASRSNCYRCN-------------SNAFK
        GDW C +C H+NF++R++CQRC  P+ GG            P +  +       +  GDWYCN   CG HN+A+RS+C++C              +  F 
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPD----------PTTYEYHKTDHQALLAGDWYCN---CGAHNYASRSNCYRCN-------------SNAFK

Query:  NVDNIGALPG------------------WKSGDWICTRIGCEMHNYASRMECYKCNTPRD
        ++ N+G   G                  WKSGDWIC R GC  HN+ASR EC++CN P++
Subjt:  NVDNIGALPG------------------WKSGDWICTRIGCEMHNYASRMECYKCNTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGAACATGAACTGGTCGGGAGGCGACTGGATGTGCGGCGTGTGCGAGCACGTGAACTTCAAGAAGAGAGAAGCCTGCCAAAGATGTGGGTACCCAAAATATGG
TGGCCCTGATCCCACAACATATGAATACCATAAAACAGATCATCAAGCTCTCTTGGCTGGAGATTGGTACTGCAACTGTGGAGCTCACAACTATGCCAGCAGATCAAACT
GCTACAGATGCAATAGTAATGCGTTTAAGAATGTGGATAATATTGGTGCCTTGCCTGGATGGAAATCTGGGGATTGGATTTGCACTAGAATAGGATGCGAAATGCACAAT
TATGCGAGTAGGATGGAATGCTACAAATGCAACACTCCGAGGGATTTTGGT
mRNA sequenceShow/hide mRNA sequence
CACCAAAATTTCCCTATTTCCAAACCCAAACTTCACAGAACAATCCTTCAGCCAATCTTGAAGGAAGATATATGACGATGAACATGAACTGGTCGGGAGGCGACTGGATG
TGCGGCGTGTGCGAGCACGTGAACTTCAAGAAGAGAGAAGCCTGCCAAAGATGTGGGTACCCAAAATATGGTGGCCCTGATCCCACAACATATGAATACCATAAAACAGA
TCATCAAGCTCTCTTGGCTGGAGATTGGTACTGCAACTGTGGAGCTCACAACTATGCCAGCAGATCAAACTGCTACAGATGCAATAGTAATGCGTTTAAGAATGTGGATA
ATATTGGTGCCTTGCCTGGATGGAAATCTGGGGATTGGATTTGCACTAGAATAGGATGCGAAATGCACAATTATGCGAGTAGGATGGAATGCTACAAATGCAACACTCCG
AGGGATTTTGGT
Protein sequenceShow/hide protein sequence
MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEMHN
YASRMECYKCNTPRDFG