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MC08g2489 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2489
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionarabinogalactan protein 22
Genome locationMC08:33705573..33705876
RNA-Seq ExpressionMC08g2489
SyntenyMC08g2489
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061559.1 putative Arabinogalactan protein 22 [Cucumis melo var. makuwa]3.64e-2478.46Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MSS+KL AVP  G L FL +LQLA+GHSHDISPA  GPSNDGAAIDQGIAYVLLL+ALA+TYI+H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

KAF8034376.1 hypothetical protein BT93_C0621 [Corymbia citriodora subsp. variegata]1.14e-1764.62Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        M++M+   VP+    MFLTLLQL+YG S   SPAP GPSNDG AIDQGIAYVLL  ALA+TY+ H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

KAF9662510.1 hypothetical protein SADUNF_Sadunf18G0060600 [Salix dunnii]1.16e-1861.54Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        M+SM+L+A+PI G  MFL LL+  +G     SPAP GPSNDG  IDQGIAYVLL++ALA+TY++H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

KGN60622.1 hypothetical protein Csa_019490 [Cucumis sativus]1.08e-2584.62Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MSS+KL AVPI G L FL +LQLA+GHSHDISPA AGPSNDGAAIDQGIAYVLLL+ALAVTYIVH
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

OAY53733.1 hypothetical protein MANES_03G019400v8 [Manihot esculenta]9.93e-2066.15Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MS MKLF +PI GL+ FL L+QL+YG     SPAP GPS+DG AIDQGIA++L+LVALAVTY++H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

TrEMBL top hitse value%identityAlignment
A0A059CP27 Uncharacterized protein1.36e-1764.62Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        M++++   +P+    MFLTLLQL YG S   SPAP GPSNDG AIDQGIAY LLLVALAVTY+ H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

A0A0A0LIU0 Uncharacterized protein5.25e-2684.62Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MSS+KL AVPI G L FL +LQLA+GHSHDISPA AGPSNDGAAIDQGIAYVLLL+ALAVTYIVH
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

A0A2C9W3S5 Uncharacterized protein4.81e-2066.15Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MS MKLF +PI GL+ FL L+QL+YG     SPAP GPS+DG AIDQGIA++L+LVALAVTY++H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

A0A5A7V7C0 Putative Arabinogalactan protein 221.76e-2478.46Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MSS+KL AVP  G L FL +LQLA+GHSHDISPA  GPSNDGAAIDQGIAYVLLL+ALA+TYI+H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

A0A7J8LS18 Uncharacterized protein1.98e-1762.12Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPA-GPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MSS+K+  V +   L+F  + QL YG + D SPAPA GPSNDGAAIDQGIAY+LLL+ALA+TY++H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPA-GPSNDGAAIDQGIAYVLLLVALAVTYIVH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 161.1e-0545.61Show/hide
Query:  ITG--LLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        +TG  L  F+  + L+   +  ++PAPA P++DG +IDQGIAY+L++VAL +TY++H
Subjt:  ITG--LLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

Q8L9T8 Arabinogalactan protein 417.8e-0750Show/hide
Query:  MSSMKL-FAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MS  +L F V     ++F  LL +A  H+   +PAPA P++DG  IDQGIAYVL+LVAL +TY++H
Subjt:  MSSMKL-FAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

Q9FK16 Arabinogalactan protein 226.4e-0949.23Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        M+S+K F + I  + + ++++ L    SH  SPAPA P++DG +IDQGIAYVL++VALA+TY +H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

Q9M373 Arabinogalactan protein 201.9e-0539.66Show/hide
Query:  AVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        +V +  L  F+  +   +  +  ++PAP+ P++DG +IDQGIAY+L++VAL +TY++H
Subjt:  AVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 168.0e-0745.61Show/hide
Query:  ITG--LLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        +TG  L  F+  + L+   +  ++PAPA P++DG +IDQGIAY+L++VAL +TY++H
Subjt:  ITG--LLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

AT3G61640.1 arabinogalactan protein 201.4e-0639.66Show/hide
Query:  AVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        +V +  L  F+  +   +  +  ++PAP+ P++DG +IDQGIAY+L++VAL +TY++H
Subjt:  AVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

AT5G24105.1 arabinogalactan protein 415.5e-0850Show/hide
Query:  MSSMKL-FAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        MS  +L F V     ++F  LL +A  H+   +PAPA P++DG  IDQGIAYVL+LVAL +TY++H
Subjt:  MSSMKL-FAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH

AT5G53250.1 arabinogalactan protein 224.5e-1049.23Show/hide
Query:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH
        M+S+K F + I  + + ++++ L    SH  SPAPA P++DG +IDQGIAYVL++VALA+TY +H
Subjt:  MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGATGAAGCTATTCGCCGTTCCGATCACCGGATTACTCATGTTCTTGACTCTTCTGCAACTAGCCTACGGGCACTCGCACGATATTTCGCCGGCGCCGGCGGG
TCCTTCGAACGACGGCGCTGCAATTGACCAAGGGATTGCTTACGTTCTTCTTCTGGTGGCCCTCGCCGTTACTTACATCGTCCAT
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGATGAAGCTATTCGCCGTTCCGATCACCGGATTACTCATGTTCTTGACTCTTCTGCAACTAGCCTACGGGCACTCGCACGATATTTCGCCGGCGCCGGCGGG
TCCTTCGAACGACGGCGCTGCAATTGACCAAGGGATTGCTTACGTTCTTCTTCTGGTGGCCCTCGCCGTTACTTACATCGTCCAT
Protein sequenceShow/hide protein sequence
MSSMKLFAVPITGLLMFLTLLQLAYGHSHDISPAPAGPSNDGAAIDQGIAYVLLLVALAVTYIVH