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MC08g2520 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2520
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase RHA1B-like
Genome locationMC08:33977497..33977814
RNA-Seq ExpressionMC08g2520
SyntenyMC08g2520
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599476.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.96e-5683.5Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

KAG7030453.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.21e-5583.5Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

XP_022154667.1 E3 ubiquitin-protein ligase RHA1B-like [Momordica charantia]2.31e-73100Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCRRRV
        LCRRRV
Subjt:  LCRRRV

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]3.96e-5683.5Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

XP_023545409.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.61e-5582.52Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAV+V AETTRNLA AYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein5.99e-4872.82Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAA AV+ E T NL + YP+E LFDLD VLSG DD GCC +T    SDS VAD PTVVADVCAVC +DF  DE GKQIPCGHVYHE CISSWL VADCCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

A0A1S4DZX3 RING-H2 finger protein ATL5-like6.88e-4571.15Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCC
        MAA AV+ E T  L + YP+E LFDLD VLSG DD  C C +T    SDS VAD PTVVADVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCC
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCC

Query:  PLCR
        PLCR
Subjt:  PLCR

A0A5A7V2P4 RING-H2 finger protein ATL5-like6.88e-4571.15Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCC
        MAA AV+ E T  L + YP+E LFDLD VLSG DD  C C +T    SDS VAD PTVVADVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCC
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCC

Query:  PLCR
        PLCR
Subjt:  PLCR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like1.12e-73100Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCRRRV
        LCRRRV
Subjt:  LCRRRV

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like1.92e-5683.5Show/hide
Query:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP
        MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCP
Subjt:  MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCP

Query:  LCR
        LCR
Subjt:  LCR

SwissProt top hitse value%identityAlignment
O22283 Probable E3 ubiquitin-protein ligase RHC2A5.2e-0844.44Show/hide
Query:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV
        CAVC E+F      +++PC H+YH  CI  WLA+ + CP+CR  +
Subjt:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV

P0CH30 E3 ubiquitin-protein ligase RING14.0e-0844.44Show/hide
Query:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV
        CAVC +DF      KQ+PC H+YH+ C+  WL + + CP+CR  +
Subjt:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV

P90990 E3 ubiquitin-protein ligase trul-11.4e-0848.89Show/hide
Query:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV
        C++CFED + ++    I CGH+YH  CIS W+A    CP CRR V
Subjt:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV

Q9VHI7 E3 ubiquitin-protein ligase Iruka4.7e-0946.51Show/hide
Query:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRR
        C++C++DF+ DE  +++PC H+YHE CI  WL +   CP+CR+
Subjt:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRR

Q9ZV51 RING-H2 finger protein ATL562.3e-0847.83Show/hide
Query:  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV
        C VCF+ FR  +  + +P CGHV+H  C+ +WL  A  CP+CR RV
Subjt:  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.1e-1045.61Show/hide
Query:  IVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV
        I+ D   V   VCA+C E+F   E GK++ C H+YH  CI SWL + + CP+CR  V
Subjt:  IVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV

AT2G18670.1 RING/U-box superfamily protein1.6e-0947.83Show/hide
Query:  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV
        C VCF+ FR  +  + +P CGHV+H  C+ +WL  A  CP+CR RV
Subjt:  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV

AT2G39720.1 RING-H2 finger C2A3.7e-0944.44Show/hide
Query:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV
        CAVC E+F      +++PC H+YH  CI  WLA+ + CP+CR  +
Subjt:  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV

AT2G44330.1 RING/U-box superfamily protein3.7e-0942.86Show/hide
Query:  VTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCR
        +++A+S DS    LP      CA+C EDF   E  +++PC H+YH  CI  WL   + CPLCR
Subjt:  VTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCR

AT3G60080.1 RING/U-box superfamily protein1.6e-0951.16Show/hide
Query:  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCR
        +CAVC EDF   E  +++PC H+YH  CI  WL+  + CPLCR
Subjt:  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGTTGCTGTGCTGGCCGAGACGACAAGAAACTTAGCGGCGGCGTATCCAATGGAGCTTCTATTTGACCTGGACATGGTTCTCTCCGGCGACGACGAC
TTCGGTTGCTGCCACGTCACCGCGGCTAATTCCTCCGATTCTATTGTAGCGGATTTGCCGACGGTGGTGGCCGACGTTTGCGCCGTTTGCTTCGAGGATTTCCGG
TCAGACGAGGGCGGAAAGCAAATCCCCTGCGGACACGTGTACCATGAGCCTTGCATCTCCTCCTGGCTCGCAGTCGCCGACTGCTGCCCCCTCTGCCGCCGCCGA
GTG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGTTGCTGTGCTGGCCGAGACGACAAGAAACTTAGCGGCGGCGTATCCAATGGAGCTTCTATTTGACCTGGACATGGTTCTCTCCGGCGACGACGAC
TTCGGTTGCTGCCACGTCACCGCGGCTAATTCCTCCGATTCTATTGTAGCGGATTTGCCGACGGTGGTGGCCGACGTTTGCGCCGTTTGCTTCGAGGATTTCCGG
TCAGACGAGGGCGGAAAGCAAATCCCCTGCGGACACGTGTACCATGAGCCTTGCATCTCCTCCTGGCTCGCAGTCGCCGACTGCTGCCCCCTCTGCCGCCGCCGA
GTG
Protein sequenceShow/hide protein sequence
MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRR
V