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MC08g2521 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2521
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase
Genome locationMC08:33982271..33982408
RNA-Seq ExpressionMC08g2521
SyntenyMC08g2521
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061529.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]1.94e-2386.67Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        CAVCMEDF PDE GKQI CGHVYH+ CISSWLSVGD CPLCRRHI
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
XP_022965415.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]3.35e-2380.43Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVCME+FR DE GKQI CGHVYH+ CISSWLSVGDCCPLCR H+
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]2.29e-2380.43Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVCME+FR DE GKQI CGHVYH+ CISSWLSVGDCCPLCR H+
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]7.89e-2378.26Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVC+EDF PDE+GKQI CGHVYHE CISSWL+V DCCPLCR H+
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
XP_038877426.1 E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]2.57e-2382.61Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVC+EDF PDESGKQI CGHVYH+ C+SSWLSVGD CPLCRRHI
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
TrEMBL top hitse value%identityAlignment
A0A1S4DZX3 RING-H2 finger protein ATL5-like2.26e-2281.4Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
        +CAVC++DFRPDE+GKQI CGHVYHE CISSWL+V DCCPLCR
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
A0A5A7V2P4 RING-H2 finger protein ATL5-like2.26e-2281.4Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
        +CAVC++DFRPDE+GKQI CGHVYHE CISSWL+V DCCPLCR
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
A0A5A7V793 RING-H2 finger protein ATL5-like9.41e-2486.67Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        CAVCMEDF PDE GKQI CGHVYH+ CISSWLSVGD CPLCRRHI
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.39e-2278.26Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVC EDFR DE GKQI CGHVYHE CISSWL+V DCCPLCRR +
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like1.62e-2380.43Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CAVCME+FR DE GKQI CGHVYH+ CISSWLSVGDCCPLCR H+
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
SwissProt top hitse value%identityAlignment
O22283 Probable E3 ubiquitin-protein ligase RHC2A8.5e-0842.22Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        CAVC E+F    S +++ C H+YH  CI  WL++ + CP+CR  +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
Q6DIP3 E3 ubiquitin-protein ligase RNF1266.5e-0844.44Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        C VC ED+   ES +Q+ C H++H  CI  WL   D CP+CR+ +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
Q6IRP0 E3 ubiquitin-protein ligase RNF126-B6.5e-0844.44Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        C VC ED+   ES +Q+ C H++H  CI  WL   D CP+CR+ +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
Q91YL2 E3 ubiquitin-protein ligase RNF1263.8e-0844.44Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        C VC ED+   ES +Q+ C H++H+ CI  WL   D CP+CR+ +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
Q9VHI7 E3 ubiquitin-protein ligase Iruka3.5e-0942.22Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        C++C +DF+ DE+ +++ C H+YHE CI  WL++   CP+CR+ +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein2.2e-1148.84Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
        +CA+C E+F   E GK+++C H+YH  CI SWL++ + CP+CR
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
AT2G39720.1 RING-H2 finger C2A6.1e-0942.22Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        CAVC E+F    S +++ C H+YH  CI  WL++ + CP+CR  +
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
AT2G44330.1 RING/U-box superfamily protein2.1e-0950Show/hide
Query:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
        CA+C EDF   ES +++ C H+YH  CI  WL+  + CPLCR
Subjt:  CAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
AT3G30460.1 RING/U-box superfamily protein2.1e-0943.48Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
        +CA+C E+   +E   ++ C H YH+ CIS+WLS  + CPLCR ++
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI
AT3G60080.1 RING/U-box superfamily protein4.2e-1053.49Show/hide
Query:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR
        +CAVC EDF   ES +++ C H+YH  CI  WLS  + CPLCR
Subjt:  ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATGTGCTGTCTGCATGGAGGATTTCCGGCCGGACGAATCCGGTAAACAGATCCGCTGCGGCCATGTTTACCACGAAATTTGCATATCCTCGTGGCTCTCCGTCGGCGA
CTGCTGCCCTCTCTGCCGCCGCCATATC
mRNA sequenceShow/hide mRNA sequence
ATATGTGCTGTCTGCATGGAGGATTTCCGGCCGGACGAATCCGGTAAACAGATCCGCTGCGGCCATGTTTACCACGAAATTTGCATATCCTCGTGGCTCTCCGTCGGCGA
CTGCTGCCCTCTCTGCCGCCGCCATATC
Protein sequenceShow/hide protein sequence
ICAVCMEDFRPDESGKQIRCGHVYHEICISSWLSVGDCCPLCRRHI