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MC08g2535 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2535
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC08:34094840..34094982
RNA-Seq ExpressionMC08g2535
SyntenyMC08g2535
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033985.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.40e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.48e-0847.92Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT +K+Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
KAA0067274.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.16e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
TYK10888.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.82e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
TYK28859.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.06e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
TrEMBL top hitse value%identityAlignment
A0A5A7SXS1 LINE-1 retrotransposable element ORF2 protein1.64e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein7.15e-0947.92Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT +K+Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
A0A5A7VIU9 LINE-1 retrotransposable element ORF2 protein2.50e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
A0A5D3CI43 LINE-1 retrotransposable element ORF2 protein1.37e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
A0A5D3DZM5 LINE-1 retrotransposable element ORF2 protein3.42e-0845.83Show/hide
Query:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
        KCKFFIW ++H+ LNT + +Q+R P   + P  CI  +S++E ++HLF
Subjt:  KCKFFIWCILHRALNTQEKLQRR-PKFIVGPGCCILYKSASESLDHLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGTAAGTTCTTTATTTGGTGTATTCTTCACCGTGCTTTAAACACCCAGGAAAAGCTACAGCGTCGCCCCAAATTTATAGTTGGTCCTGGGTGTTGTATTCTCTACAA
ATCGGCCTCAGAAAGCTTGGACCATCTATTC
mRNA sequenceShow/hide mRNA sequence
AAATGTAAGTTCTTTATTTGGTGTATTCTTCACCGTGCTTTAAACACCCAGGAAAAGCTACAGCGTCGCCCCAAATTTATAGTTGGTCCTGGGTGTTGTATTCTCTACAA
ATCGGCCTCAGAAAGCTTGGACCATCTATTC
Protein sequenceShow/hide protein sequence
KCKFFIWCILHRALNTQEKLQRRPKFIVGPGCCILYKSASESLDHLF