; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2568 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2568
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein L18ae family
Genome locationMC08:34343177..34346939
RNA-Seq ExpressionMC08g2568
SyntenyMC08g2568
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459564.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo]1.50e-7691.2Show/hide
Query:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER
        +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRER
Subjt:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER

Query:  AGLAASAIAALACSVILLVVVAVLL
        AGLAASAIAALACS+ILL+VVAVLL
Subjt:  AGLAASAIAALACSVILLVVVAVLL

XP_022154699.1 uncharacterized protein LOC111021894 isoform X1 [Momordica charantia]2.50e-95100Show/hide
Query:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
        MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
Subjt:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS

Query:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
        FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
Subjt:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA

XP_022154700.1 uncharacterized protein LOC111021894 isoform X2 [Momordica charantia]9.51e-77100Show/hide
Query:  ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD
        ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD
Subjt:  ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD

Query:  PRERAGLAASAIA
        PRERAGLAASAIA
Subjt:  PRERAGLAASAIA

XP_022154701.1 uncharacterized protein LOC111021894 isoform X3 [Momordica charantia]3.95e-104100Show/hide
Query:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
        MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
Subjt:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS

Query:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS
        FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS
Subjt:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS

XP_038889607.1 uncharacterized protein LOC120079478 [Benincasa hispida]1.82e-7792.8Show/hide
Query:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER
        +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDASDH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRER
Subjt:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER

Query:  AGLAASAIAALACSVILLVVVAVLL
        AGLAASAIAALACS+ILLVVVAVLL
Subjt:  AGLAASAIAALACSVILLVVVAVLL

TrEMBL top hitse value%identityAlignment
A0A1S3CAZ9 uncharacterized protein LOC1034986587.24e-7791.2Show/hide
Query:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER
        +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRER
Subjt:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER

Query:  AGLAASAIAALACSVILLVVVAVLL
        AGLAASAIAALACS+ILL+VVAVLL
Subjt:  AGLAASAIAALACSVILLVVVAVLL

A0A5D3CGZ6 60S ribosomal protein L18a-17.24e-7791.2Show/hide
Query:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER
        +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRER
Subjt:  ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRER

Query:  AGLAASAIAALACSVILLVVVAVLL
        AGLAASAIAALACS+ILL+VVAVLL
Subjt:  AGLAASAIAALACSVILLVVVAVLL

A0A6J1DKD4 uncharacterized protein LOC111021894 isoform X24.61e-77100Show/hide
Query:  ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD
        ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD
Subjt:  ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRD

Query:  PRERAGLAASAIA
        PRERAGLAASAIA
Subjt:  PRERAGLAASAIA

A0A6J1DMX6 uncharacterized protein LOC111021894 isoform X11.21e-95100Show/hide
Query:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
        MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
Subjt:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS

Query:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
        FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
Subjt:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA

A0A6J1DPH7 uncharacterized protein LOC111021894 isoform X31.91e-104100Show/hide
Query:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
        MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS
Subjt:  MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFS

Query:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS
        FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS
Subjt:  FLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54217.1 Ribosomal protein L18ae family1.5e-2264.04Show/hide
Query:  RSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL
        + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V VL+
Subjt:  RSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL

AT1G54217.2 Ribosomal protein L18ae family2.9e-2361.05Show/hide
Query:  DASDHVRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL
        D  +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V VL+
Subjt:  DASDHVRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL

AT4G26060.1 Ribosomal protein L18ae family2.0e-3562.18Show/hide
Query:  QLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAG
        +LVKSV+DKH  L+RP A++ S      KDA    + +YTL++DV++ + G+YDKPLPCFGCGIGWFSFLLGF FP +WYYAT+LYF N  R+DPRERAG
Subjt:  QLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAG

Query:  LAASAIAALACSVILLVVV
        LAASAI A+  S++LLV+V
Subjt:  LAASAIAALACSVILLVVV

AT5G57060.1 FUNCTIONS IN: molecular_function unknown2.4e-3353.28Show/hide
Query:  NSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYAT
        + N  F   + RT    +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA 
Subjt:  NSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYAT

Query:  VLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA
         LYF N  R+DPRERAGLAASAI A+  S++LLV+ A
Subjt:  VLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA

AT5G57060.2 BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1)1.2e-2966.3Show/hide
Query:  KDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA
        KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  LYF N  R+DPRERAGLAASAI A+  S++LLV+ A
Subjt:  KDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATATAGAAATCGAAGGGATCCAATTCGAGCAAGCTTCAAATTCAAACGTCAACTTTGATCAAAAGGATGCAAGAACCGGGGAGACTTTCCAACTGGTGAAATC
GGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGGCCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTC
TCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTG
TGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGACTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTT
AGTCGTTGTAGCTGTTCTACTGTCATAG
mRNA sequenceShow/hide mRNA sequence
GCTTTTCGTTATCTTTCAAGTCTCACAAACAAAAGAGTCAATTTTCTCAGCGTTTAGCCGATGGAAAGATGAAGTTGATCGTTGCTTGACGTTTAAATTTCCTGCGTAGT
ACAAGGAAGCCGTCTTCGTCCTCCATTCCTCCGCTCATTTCATCTCCGATCCCTACAAAGCAAGAGAAATTACAGTCTCTCAGGCGCTTCCACTCGCCTCTTCATCTCTT
TGGTGTAGAAAGTGGATACTGCAAACTTGAAGCTTTCATCATTCCATAAGCACCTGCTTCAACATGGATCCAAGTACCCTAATTCTTCTTACAACTTGGATTGCACATGA
TAGCTCTTACATTTTGACTCTGAGTTGCATTAGATGATTTTTATTTATAGGATTGTAATATCAAACATGGTCTTGGTAATTTCTTTGATACCCAGATCATATAAGGTGTC
TTGGACATTCATATGTGCCTATGCACATTGTTATACTTTAACATTTTTAGTAGTAATATATGTTCAATATAGAAATCGAAGGGATCCAATTCGAGCAAGCTTCAAATTCA
AACGTCAACTTTGATCAAAAGGATGCAAGAACCGGGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTC
AATATTCAGAGGCCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCAT
GTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGG
GAACGAGCTGGACTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTGTCATAGCCTCGCCTCCACGGCTGAAACTG
CATTCTTGGCTCCTTCAGCGTCGCCAACACAGTCTCTTGCAGAACAGGGTTCCATGGATGTGCAGATAAAGATTAAATGTGTGACAATGGTGAATTGATTTCTGTTACTT
TTATTTGCAACAAAAATGTAAATGATTATAAATCATATTTTCATATGTTTGCCACCTCTTTCAAAAGAGAGTTGTCGCATTTATAATACACAAAGTTACAAACAGTTATG
TAATACATGAATTTTATACTTTACACGTTTTTTATATTATATCAATAAAGTCGAGGATCCCTCTATTTTCCCAAGCTAAACAATCTGGATTTCTCGCCTTCACAGAACTG
ATTCTTCCGAAGCCAGCCAATCAATGCAACCAAATACAAAATCATGTTTGGCAGCATAACCTAAAGAGTTCTTCCAGAAAATAAGCAATTCAACATTACAAAAAATGAGG
AATGTGATCGTCATCGCCATTGTCATTCTACGTAAGGGAATTATACAAGAAGATTAAATATCCACTGTCTCTGCTTCTTTCTTTTCAGGATTGTATTGCAACCTAACGTA
AAGAAATAAATTTACTTTTGACACAACAATAATAGTACCAAATGTTTCTTTTCAAAATTTCTTATCCTATGAATGGAGCAGATCGTACCCTAACCCACTGAAATATTTCA
TTAACTCTCACCTCCACGATTAATCGAACATGTGATCGTCTAAAACTCACTAGACACAAATAGGCAAGCAAGTGCCGCAAAAATGAATATTAAATGGTGTTTCAAGCTTT
AGCTGTTAGCCGAACATGTTTCTTCTCAACGGCAAATTTTGAGCTCGAGTTGATCTGGCAGTCACAGGAAACATTGTTAGCAAATGGAATGCCCATTAGTTTCAATTTCA
AAGCTCAACCATACATCCAAAAACTTATAAATAGACAACAAATGATCTGGAAAATATAGATCAATGTGCTACCTTTTCCTCGAGCATCTCGATGAGTTTGGTTTCATCTT
CTGTGACGCCAGATTCACGAACAGATTTGAGAGCAAGTTTTCTCAGTTTCGACAACTTGAGAACACCATC
Protein sequenceShow/hide protein sequence
MFNIEIEGIQFEQASNSNVNFDQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLV
WYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLLS