; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g2584 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g2584
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 20
Genome locationMC08:34445471..34447520
RNA-Seq ExpressionMC08g2584
SyntenyMC08g2584
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR013921 - Mediator complex, subunit Med20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030510.1 Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argyrosperma subsp. argyrosperma]9.00e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRD N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT+ HTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus]5.36e-13592.09Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSRQVM  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL DYYT+ HTAVQY 
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo]3.10e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YT  HTAVQY 
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata]3.10e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRD N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT+ HTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida]1.37e-13793.49Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQNLPAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSR+VM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT+ HTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 202.59e-13592.09Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSRQVM  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL DYYT+ HTAVQY 
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 201.50e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YT  HTAVQY 
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 208.24e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRDQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YT  HTAVQY 
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 201.50e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRD N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT+ HTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 201.50e-13491.16Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWKAT TFY+PILRD N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT+ HTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTN-HTAVQYA

Query:  NVMAQLIGTVQAVQS
        NVMAQLI TVQAVQS
Subjt:  NVMAQLIGTVQAVQS

SwissProt top hitse value%identityAlignment
Q54FL3 Putative mediator of RNA polymerase II transcription subunit 201.4e-0726.53Show/hide
Query:  LNEVSQCVESIHGVK--GGKWKATTFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLG
        L E+++ +E + G+K   G    + +   +    NL     PR+F  +   E+P K + + R    ++E D  + +I+EK  SYK R        +Y+LG
Subjt:  LNEVSQCVESIHGVK--GGKWKATTFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLG

Query:  DFQLRVGKVVPNHSENLRGIVMEMEYL--------PISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLL--DYYTNHTAVQYANV
        DF +RVG +V      +RGI++E+EY         P +  +   + + G    + E +  S           +F+ Y  L   Y   HT+ QY N+
Subjt:  DFQLRVGKVVPNHSENLRGIVMEMEYL--------PISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLL--DYYTNHTAVQYANV

Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a1.0e-7970.56Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPN  STV+SQILNE +QCVESI+GVK G+WKAT  +Y+P+L+DQ     EFPRDFL ISL +QPNKYY IIR QRIVLEAD +IQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
         +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VM  F E+W EA++K SLPG+F++I+ NF E+GL D YT  HTAV+YA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQAVQ
         VMA +I TVQAV+
Subjt:  NVMAQLIGTVQAVQ

Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b5.6e-7061.79Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        +LHWQPN  ST +SQILNEV+Q +ES++GVK G WKAT  +Y+P+L+DQ    AEFPR+F+ ISLPE+P+KYY +IR QRIV+EAD +IQ IME LQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
         +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++M  F E+WQEAMSK SLPG+F++ E NF ++GL D YT  HTAV YA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQA
          MA L+  +QA
Subjt:  NVMAQLIGTVQA

Arabidopsis top hitse value%identityAlignment
AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1)1.1e-1257.35Show/hide
Query:  MEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQ-YANVMAQLIGTVQAV
        ME +R+VM  F E+W EA++K SLPG+F++ + NF E+GL D YT  HTAV+ YA VMA +I TVQAV
Subjt:  MEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQ-YANVMAQLIGTVQAV

AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex7.2e-8170.56Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        VLHWQPN  STV+SQILNE +QCVESI+GVK G+WKAT  +Y+P+L+DQ     EFPRDFL ISL +QPNKYY IIR QRIVLEAD +IQ IMEKLQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
         +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VM  F E+W EA++K SLPG+F++I+ NF E+GL D YT  HTAV+YA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQAVQ
         VMA +I TVQAV+
Subjt:  NVMAQLIGTVQAVQ

AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex4.0e-7161.79Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK
        +LHWQPN  ST +SQILNEV+Q +ES++GVK G WKAT  +Y+P+L+DQ    AEFPR+F+ ISLPE+P+KYY +IR QRIV+EAD +IQ IME LQSYK
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKAT-TFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA
         +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++M  F E+WQEAMSK SLPG+F++ E NF ++GL D YT  HTAV YA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYT-NHTAVQYA

Query:  NVMAQLIGTVQA
          MA L+  +QA
Subjt:  NVMAQLIGTVQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTTGCATTGGCAACCGAATGCCAGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCTCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGTGGAAAGC
TACTACCTTTTACAGACCCATCTTACGAGACCAAAACTTACCGGCGGCCGAGTTCCCACGCGACTTTCTCAGAATCTCACTGCCGGAGCAACCAAACAAGTATTATCTTA
TAATCCGTGGCCAACGGATCGTCTTAGAAGCTGATTTTACGATTCAAACTATAATGGAGAAGTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGAGGGGTTCCAA
TACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAACCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATGGAGTATCTTCCAATTTCTTCAATGGA
GAAATCAAGACAGGTGATGGGGGGATTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTGCCAGGTCGTTTCATGCACATAGAACCGAACTTTGCAGAATATG
GACTGTTGGATTACTACACTAACCACACAGCCGTTCAGTATGCCAATGTCATGGCTCAACTAATAGGAACAGTTCAAGCAGTTCAATCA
mRNA sequenceShow/hide mRNA sequence
GTTTTGCATTGGCAACCGAATGCCAGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCTCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGTGGAAAGC
TACTACCTTTTACAGACCCATCTTACGAGACCAAAACTTACCGGCGGCCGAGTTCCCACGCGACTTTCTCAGAATCTCACTGCCGGAGCAACCAAACAAGTATTATCTTA
TAATCCGTGGCCAACGGATCGTCTTAGAAGCTGATTTTACGATTCAAACTATAATGGAGAAGTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGAGGGGTTCCAA
TACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAACCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATGGAGTATCTTCCAATTTCTTCAATGGA
GAAATCAAGACAGGTGATGGGGGGATTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTGCCAGGTCGTTTCATGCACATAGAACCGAACTTTGCAGAATATG
GACTGTTGGATTACTACACTAACCACACAGCCGTTCAGTATGCCAATGTCATGGCTCAACTAATAGGAACAGTTCAAGCAGTTCAATCA
Protein sequenceShow/hide protein sequence
VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKATTFYRPILRDQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQ
YQLGDFQLRVGKVVPNHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTNHTAVQYANVMAQLIGTVQAVQS