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MC08g_new0010 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g_new0010
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease H
Genome locationMC08:737343..738138
RNA-Seq ExpressionMC08g_new0010
SyntenyMC08g_new0010
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ19982.1 hypothetical protein Acr_28g0006870 [Actinidia rufa]5.54e-3757.02Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLS
        MP+ R+ NFD+++N   L +NLDLLEEKR  ++LR A Y+N++A+YYN RVK R F PGDLVLRKV       + G L P WEGPY+V+K+ R G Y L 
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLS

Query:  DLNGRQLPHPWNAEHLRVYHQ
        DLNG+ L HPWNAEHL+ Y+Q
Subjt:  DLNGRQLPHPWNAEHLRVYHQ

KAG1346701.1 hypothetical protein COCNU_06G005300 [Cocos nucifera]4.24e-3753.33Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM----QHVGALEPNWEGPYRVLKILRPGAYLLSD
        +P+ R+  F+EQ N + L  NLDLLEEKR  +++R+A YQ ++ARYYN+RVK + F+ GDLVLR+      Q  G L PNWEGPY V++++RPG Y L +
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM----QHVGALEPNWEGPYRVLKILRPGAYLLSD

Query:  LNGRQLPHPWNAEHLRVYHQ
        L G  LP PWN+E+LR+YHQ
Subjt:  LNGRQLPHPWNAEHLRVYHQ

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]2.62e-6383.62Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        MPT RVENFD Q NSEA L+NLDLLEEKRS+SQL+LAEYQNRMARYYN R +VR FKPGDL L+KVMQHV ALEPNWEGPYRVLK++RP AYLLSDLNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAE LRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]2.08e-6487.07Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        M TPRVENF+EQ NSEALLVNLDLL EKRSHSQLRLAEY NRMA YYNARVKVRMFKPGDLVL+KVMQHV AL+PNWEGPYRVL+ILRP AYL   LNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAEHLRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]6.90e-6895.69Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVR FKP DLVL+KVMQHVGALEPNWEGPYRVLKILRP AYLLSDLNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAEHLRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

TrEMBL top hitse value%identityAlignment
A0A2N9I4M7 Uncharacterized protein1.49e-3652.54Show/hide
Query:  TPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLSDL
        T R   +D+Q N E L +NLDL++E R  ++ R+  YQ +MAR+YN++VK R    GDLVLR+V         G L  NWEGPY+V++I RPG Y L D+
Subjt:  TPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLSDL

Query:  NGRQLPHPWNAEHLRVYH
        NGR+LPHPWNAEHLR Y+
Subjt:  NGRQLPHPWNAEHLRVYH

A0A6J1DS38 uncharacterized protein LOC1110230171.27e-6383.62Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        MPT RVENFD Q NSEA L+NLDLLEEKRS+SQL+LAEYQNRMARYYN R +VR FKPGDL L+KVMQHV ALEPNWEGPYRVLK++RP AYLLSDLNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAE LRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

A0A6J1DUF4 uncharacterized protein LOC1110232031.01e-6487.07Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        M TPRVENF+EQ NSEALLVNLDLL EKRSHSQLRLAEY NRMA YYNARVKVRMFKPGDLVL+KVMQHV AL+PNWEGPYRVL+ILRP AYL   LNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAEHLRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

A0A6J1DWM2 Ribonuclease H3.34e-6895.69Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR
        MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVR FKP DLVL+KVMQHVGALEPNWEGPYRVLKILRP AYLLSDLNGR
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGR

Query:  QLPHPWNAEHLRVYHQ
        QLPHPWNAEHLRVY+Q
Subjt:  QLPHPWNAEHLRVYHQ

A0A7J0HA34 Ribonuclease H2.68e-3757.02Show/hide
Query:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLS
        MP+ R+ NFD+++N   L +NLDLLEEKR  ++LR A Y+N++A+YYN RVK R F PGDLVLRKV       + G L P WEGPY+V+K+ R G Y L 
Subjt:  MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVM-----QHVGALEPNWEGPYRVLKILRPGAYLLS

Query:  DLNGRQLPHPWNAEHLRVYHQ
        DLNG+ L HPWNAEHL+ Y+Q
Subjt:  DLNGRQLPHPWNAEHLRVYHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACACCCCGAGTGGAGAATTTCGACGAGCAAGCCAACAGTGAAGCCCTGCTCGTGAATCTTGACCTCCTCGAGGAGAAAAGATCTCACTCCCAGCTCCGGCTAGC
AGAATATCAGAACCGTATGGCTCGATACTACAACGCCAGGGTAAAAGTCAGAATGTTCAAGCCTGGCGACCTCGTCCTCAGGAAGGTAATGCAGCACGTCGGAGCACTCG
AGCCGAACTGGGAAGGTCCGTACAGAGTCCTAAAAATACTCCGACCTGGAGCGTATCTGCTGTCCGACCTCAACGGGAGACAACTCCCCCACCCATGGAACGCCGAGCAT
TTGCGAGTTTATCATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACACCCCGAGTGGAGAATTTCGACGAGCAAGCCAACAGTGAAGCCCTGCTCGTGAATCTTGACCTCCTCGAGGAGAAAAGATCTCACTCCCAGCTCCGGCTAGC
AGAATATCAGAACCGTATGGCTCGATACTACAACGCCAGGGTAAAAGTCAGAATGTTCAAGCCTGGCGACCTCGTCCTCAGGAAGGTAATGCAGCACGTCGGAGCACTCG
AGCCGAACTGGGAAGGTCCGTACAGAGTCCTAAAAATACTCCGACCTGGAGCGTATCTGCTGTCCGACCTCAACGGGAGACAACTCCCCCACCCATGGAACGCCGAGCAT
TTGCGAGTTTATCATCAATGA
Protein sequenceShow/hide protein sequence
MPTPRVENFDEQANSEALLVNLDLLEEKRSHSQLRLAEYQNRMARYYNARVKVRMFKPGDLVLRKVMQHVGALEPNWEGPYRVLKILRPGAYLLSDLNGRQLPHPWNAEH
LRVYHQ