; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0061 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0061
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein At4g13200, chloroplastic
Genome locationMC09:608180..611006
RNA-Seq ExpressionMC09g0061
SyntenyMC09g0061
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR040003 - Plastoglobular protein 18-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139667.1 uncharacterized protein At4g13200, chloroplastic [Cucumis sativus]1.64e-6870Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC S    GDGDSRTVLDAFFLGKALAEALTERIEST+GEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        LSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

XP_008447268.1 PREDICTED: uncharacterized protein At4g13200, chloroplastic isoform X1 [Cucumis melo]2.33e-6869.44Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        S I +SVS SPFSL+ TKPK TH+SSP+L   RS STPSNL+ RGI HF PN S R  ARC S    GDGDSRT+LDAFFLGKALAEALTERIEST+GEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        LSGIG+LQAE+QKQI DFQ+EVIERAK+AK+KAAR++ EVQ P+S S+ SPTI V+S+     S PD  SES VN DPPL
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

XP_022154385.1 uncharacterized protein At4g13200, chloroplastic [Momordica charantia]4.59e-12097.4Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG-----DGDSRTVLDAFFLGKALAEALTERIES
        SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG     DGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG-----DGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE

XP_022953678.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita moschata]2.95e-5562.5Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVSSS FS++ TK K TH SSP+L   RS ST SNLK R      PN S R  A C S    GDGD+RTVLDAFF+GKA AE LTER+ESTVGEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP
        L  IGRLQAERQ+QI+DFQEEVI+RAK+AK+KA RD+ E Q PIS SI S TI VTS+     + QQ S P+ YSE+ VN DPP
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP

XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]1.58e-7574.05Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVS SPFSL+ TKPK TH+SS +L + RS STPSNLK R I HF PN SPR  ARC S    GDGDSRTVLDAFFLGKALAEALTERIESTVGEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTS-----TDPQQLSKPDPYSESTVNLDPPL
        LSGIGRLQAE+QKQI DFQEEVIERAK+AKDKAARD+ EVQ P+S SITSPTI VTS     T+ QQLS PD  SE+ VN DPPL
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTS-----TDPQQLSKPDPYSESTVNLDPPL

TrEMBL top hitse value%identityAlignment
A0A0A0K6Q2 Uncharacterized protein7.94e-6970Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC S    GDGDSRTVLDAFFLGKALAEALTERIEST+GEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        LSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X11.13e-6869.44Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        S I +SVS SPFSL+ TKPK TH+SSP+L   RS STPSNL+ RGI HF PN S R  ARC S    GDGDSRT+LDAFFLGKALAEALTERIEST+GEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        LSGIG+LQAE+QKQI DFQ+EVIERAK+AK+KAAR++ EVQ P+S S+ SPTI V+S+     S PD  SES VN DPPL
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

A0A6J1DJG4 uncharacterized protein At4g13200, chloroplastic2.22e-12097.4Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG-----DGDSRTVLDAFFLGKALAEALTERIES
        SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG     DGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPG-----DGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE

A0A6J1GNZ1 uncharacterized protein At4g13200, chloroplastic-like1.43e-5562.5Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVSSS FS++ TK K TH SSP+L   RS ST SNLK R      PN S R  A C S    GDGD+RTVLDAFF+GKA AE LTER+ESTVGEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP
        L  IGRLQAERQ+QI+DFQEEVI+RAK+AK+KA RD+ E Q PIS SI S TI VTS+     + QQ S P+ YSE+ VN DPP
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP

A0A6J1JX27 uncharacterized protein At4g13200, chloroplastic-like1.16e-5463.04Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
        SG+ +SVS S FS+L T+ K TH SSP+L   RS ST SNLK R      PN S R  A C S    GDGD+RTVLDAFFLGKA AE LTER+ESTVGEV
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEV

Query:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP
        LS IGRLQAERQ+QI+DFQEEVIERAK+AK+KA RD+ E Q PIS SI S TI VTS+     + QQ S  + YSE+ VN DPP
Subjt:  LSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTST-----DPQQLSKPDPYSESTVNLDPP

SwissProt top hitse value%identityAlignment
Q8LDV3 Uncharacterized protein At4g13200, chloroplastic8.8e-1944.97Show/hide
Query:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSG--PGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIG
        S S FSL ++  + + HS   L  SRS      L+L  +     ++S RS    CS+ G   G+ ++++VLDAFFLGKALAE + ERIESTVGEVLS IG
Subjt:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSG--PGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIG

Query:  RLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV
        + QAE+QKQ+ + QEEV+ERAK+AK++AAR+++E Q      + S  +A+T  +P  +      S STV
Subjt:  RLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV

Arabidopsis top hitse value%identityAlignment
AT4G13200.1 unknown protein6.2e-2044.97Show/hide
Query:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSG--PGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIG
        S S FSL ++  + + HS   L  SRS      L+L  +     ++S RS    CS+ G   G+ ++++VLDAFFLGKALAE + ERIESTVGEVLS IG
Subjt:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSG--PGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIG

Query:  RLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV
        + QAE+QKQ+ + QEEV+ERAK+AK++AAR+++E Q      + S  +A+T  +P  +      S STV
Subjt:  RLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTGGGATTCGAGCTTCAGTTTCCTCGTCCCCTTTTTCACTTTTGCACACTAAACCCAAATTTACCCACCATTCATCTCCAAATCTTGCTGTATCCCGCTCCCCTTCCAC
TCCCTCAAATCTCAAGCTTCGAGGAATTCCACATTTTCCACCAAATTCCTCTCCCAGATCCAAAGCTCGTTGTTGCAGCAGCTCCGGCCCCGGTGATGGCGACAGTAGGA
CTGTTCTAGATGCCTTTTTCTTAGGGAAAGCTCTAGCAGAAGCCTTGACTGAGCGTATCGAGTCAACAGTTGGAGAGGTTCTGAGTGGGATCGGGAGGCTGCAAGCTGAA
CGACAAAAACAAATTGTTGATTTCCAGGAGGAGGTGATAGAAAGAGCTAAGAGAGCCAAGGACAAAGCTGCACGTGATTCCATAGAAGTACAAGAACCCATCTCCCCCTC
AATAACATCACCTACGATCGCAGTTACTTCGACTGATCCACAACAACTCTCGAAACCCGACCCATATTCAGAATCTACTGTGAACCTTGATCCTCCTCTCGATGTAACGA
ATGACGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
AGTGGGATTCGAGCTTCAGTTTCCTCGTCCCCTTTTTCACTTTTGCACACTAAACCCAAATTTACCCACCATTCATCTCCAAATCTTGCTGTATCCCGCTCCCCTTCCAC
TCCCTCAAATCTCAAGCTTCGAGGAATTCCACATTTTCCACCAAATTCCTCTCCCAGATCCAAAGCTCGTTGTTGCAGCAGCTCCGGCCCCGGTGATGGCGACAGTAGGA
CTGTTCTAGATGCCTTTTTCTTAGGGAAAGCTCTAGCAGAAGCCTTGACTGAGCGTATCGAGTCAACAGTTGGAGAGGTTCTGAGTGGGATCGGGAGGCTGCAAGCTGAA
CGACAAAAACAAATTGTTGATTTCCAGGAGGAGGTGATAGAAAGAGCTAAGAGAGCCAAGGACAAAGCTGCACGTGATTCCATAGAAGTACAAGAACCCATCTCCCCCTC
AATAACATCACCTACGATCGCAGTTACTTCGACTGATCCACAACAACTCTCGAAACCCGACCCATATTCAGAATCTACTGTGAACCTTGATCCTCCTCTCGATGTAACGA
ATGACGAAGAGTAATCGTCTTGCGACGTTGATTTCTCTTGTTTTTAGTCTTGTAATGAATGTAACCCATATACATACAGGTGATGATAAGTTAGTTATTCGGTCTCAAGA
TACTCATATAGTAATCGCCTATTTAGGATTCCTATGTTAAATATCTTACGAGCGTATTGATGCTGAATATCGTTAGATCACAATTTGTTGCGTAAGATTACTCAAAGTCT
ATGAATAAGAAATCATCCGAATCTGAGTTGACTCGAATACTTCGATTATTTGGCA
Protein sequenceShow/hide protein sequence
SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAE
RQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE