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MC09g0069 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0069
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC09:671339..671566
RNA-Seq ExpressionMC09g0069
SyntenyMC09g0069
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEY31237.1 RNA-directed DNA polymerase, eukaryota [Tanacetum cinerariifolium]7.29e-1139.76Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRI-----C--RIGRGTRVSFWHDRW
        LL KW+WR+++++  LW R+  A Y  S++D    + P      W  IV  ++L+KD R      C  RIG G+R SFWHD W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRI-----C--RIGRGTRVSFWHDRW

KAF5177290.1 Ribonuclease h-like superfamily protein [Thalictrum thalictroides]1.28e-1137.66Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPL-IKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        L  KW+WRY  EE  LW+R+  +KY +   ++WP  ++       W  I++  DL K    CR+G+G R  FW D W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPL-IKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

KAF5187145.1 hypothetical protein FRX31_023283 [Thalictrum thalictroides]1.83e-1540.26Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        LLAKW+WR+  E + LW+R+   KY     D+WP    Q   C  W  ++   D+ K    CR+G G R+ FWHD W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

KAF5202028.1 hypothetical protein FRX31_008385 [Thalictrum thalictroides]3.31e-1240Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHD
        L AKWIWRY  EE  LW+ + +AKY      +WP    Q   C  W  I++     K+   CR+G G+R+ FW D
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHD

TYK03140.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.82e-1138.96Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        LL KW+WRY++E N LW+RL   KY  K   D    I     K PW  I+  ID  K  +   +  G ++SFW+  W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

TrEMBL top hitse value%identityAlignment
A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein4.41e-1138.96Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        LL+KW+WRY +E N LW+RL + KY  K   D    I     K PW  I+  ID  K  +   +  G ++SFW+  W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

A0A5D3BVM7 LINE-1 retrotransposable element ORF2 protein1.37e-1138.96Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        LL KW+WRY++E N LW+RL   KY  K   D    I     K PW  I+  ID  K  +   +  G ++SFW+  W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKY-WKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

A0A7J6UYT6 Ribonuclease h-like superfamily protein6.18e-1237.66Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPL-IKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        L  KW+WRY  EE  LW+R+  +KY +   ++WP  ++       W  I++  DL K    CR+G+G R  FW D W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPL-IKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

A0A7J6VSF2 Uncharacterized protein8.84e-1640.26Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW
        LLAKW+WR+  E + LW+R+   KY     D+WP    Q   C  W  ++   D+ K    CR+G G R+ FWHD W
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW

A0A7J6WZL2 Uncharacterized protein1.60e-1240Show/hide
Query:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHD
        L AKWIWRY  EE  LW+ + +AKY      +WP    Q   C  W  I++     K+   CR+G G+R+ FW D
Subjt:  LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCP-WTQIVKYIDLVKDRRICRIGRGTRVSFWHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTTGGCTAAATGGATTTGGAGATATATTACTGAAGAAAACGTGCTATGGAAAAGACTCACCAATGCAAAATACTGGAAATCAACTGTTGATTTTTGGCCCTTGATTAA
ACCACAGCGATTCAAATGTCCTTGGACACAAATTGTGAAATACATCGATCTGGTCAAGGATAGACGCATTTGCAGAATTGGCAGAGGCACTAGAGTCAGTTTTTGGCATG
ACAGATGG
mRNA sequenceShow/hide mRNA sequence
CTTTTGGCTAAATGGATTTGGAGATATATTACTGAAGAAAACGTGCTATGGAAAAGACTCACCAATGCAAAATACTGGAAATCAACTGTTGATTTTTGGCCCTTGATTAA
ACCACAGCGATTCAAATGTCCTTGGACACAAATTGTGAAATACATCGATCTGGTCAAGGATAGACGCATTTGCAGAATTGGCAGAGGCACTAGAGTCAGTTTTTGGCATG
ACAGATGG
Protein sequenceShow/hide protein sequence
LLAKWIWRYITEENVLWKRLTNAKYWKSTVDFWPLIKPQRFKCPWTQIVKYIDLVKDRRICRIGRGTRVSFWHDRW