; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0070 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0070
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC09:687851..688261
RNA-Seq ExpressionMC09g0070
SyntenyMC09g0070
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45018.2 hypothetical protein Csa_016393 [Cucumis sativus]8.84e-6267.88Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR
        IISLQDRM +YW+DL +G++  AW +KW +HGTCSA  FD+FKYFC+GLDTYGRHAI SFL   GL PSS++   K SFI AIA+ T KKGGVICA DQ 
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR

Query:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
         R QL+  VLCY KDG T+IDCPDNVSSSCPD F+WL
Subjt:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
XP_004149779.2 ribonuclease MC [Cucumis sativus]9.12e-6267.88Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR
        IISLQDRM +YW+DL +G++  AW +KW +HGTCSA  FD+FKYFC+GLDTYGRHAI SFL   GL PSS++   K SFI AIA+ T KKGGVICA DQ 
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR

Query:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
         R QL+  VLCY KDG T+IDCPDNVSSSCPD F+WL
Subjt:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
XP_022143591.1 ribonuclease 1-like [Momordica charantia]1.26e-93100Show/hide
Query:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM
        MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM
Subjt:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM

Query:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
        VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
Subjt:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
XP_031738690.1 ribonuclease MC-like [Cucumis sativus]1.51e-2136.5Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR
        +ISL+ ++   W DL  G+N   W  +W  HG CS   F  F+YF + L+   +  +L+ L   GL P ++Q     + +  I   T K  G+ C  + +
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR

Query:  -GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
         G++QL  +VLC  KDGAT+IDCP  VS++C   F+W
Subjt:  -GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
XP_038899255.1 ribonuclease MC-like [Benincasa hispida]2.01e-7779.56Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR
        I+SLQDRM +YWQDL +G+   AW +KWAIHGTCSATVFDEFKYFC+GLDTYGRHA+LSFLVHGGLVPSS++   KTSF+KAIAD+TSKKGGVICA DQR
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR

Query:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
        GRTQL+  VLCY+KDG T+IDCPDNVSSSCPD FLWL
Subjt:  GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
TrEMBL top hitse value%identityAlignment
A0A0A0K4L1 Uncharacterized protein2.01e-5866.15Show/hide
Query:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM
        M +YW+DL +G++  AW +KW +HGTCSA  FD+FKYFC+GLDTYGRHAI SFL   GL PSS++   K SFI AIA+ T KKGGVICA DQ  R QL+ 
Subjt:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM

Query:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
         VLCY KDG T+IDCPDNVSSSCPD F+WL
Subjt:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
A0A0A0LAN6 Ribonuclease T(2)7.31e-2236.5Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR
        +ISL+ ++   W DL  G+N   W  +W  HG CS   F  F+YF + L+   +  +L+ L   GL P ++Q     + +  I   T K  G+ C  + +
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQR

Query:  -GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
         G++QL  +VLC  KDGAT+IDCP  VS++C   F+W
Subjt:  -GRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
A0A6J1CQQ9 ribonuclease 1-like6.08e-94100Show/hide
Query:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM
        MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM
Subjt:  MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKM

Query:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
        VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
Subjt:  VVLCYSKDGATMIDCPDNVSSSCPDKFLWL
A0A6J1EXD5 Ribonuclease T(2)1.69e-2033.57Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYF--CMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAAD
        I +L  ++  YW D++SG+N   W+ +W  HGTCS   F++ +YF   + + T   + +L+ L   GL P++       +   AI   T KK G+ C  +
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYF--CMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAAD

Query:  -QRGRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
         Q  + QL  ++LC+ K+G T+IDC      +CP +F+WL
Subjt:  -QRGRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWL
A0A6J1F837 Ribonuclease T(2)1.57e-2134.29Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHA--ILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICA--
        I +L+ ++  YW D++ G N   WQ +W  HG CS   F++ +YF + L+    H+  +L+ L   GL PS   +        AI   T KK G+ C   
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHA--ILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICA--

Query:  ADQRGRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
        A  + + QL  ++LC+ KDG T+IDC +    +CP +F+W
Subjt:  ADQRGRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLW
SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC4.9e-1129.92Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKK----GGVICA
        I  LQ ++   W +++  +N   W  +W  HGTCS + F++  YF + +D    + I+     G L P +A  + +T   +AI      K     G+ C 
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKK----GGVICA

Query:  ADQRGR-TQLKMVVLCYSKDGATMIDC
         D + + + L  VV C+++DG+T+IDC
Subjt:  ADQRGR-TQLKMVVLCYSKDGATMIDC
Q7M438 Ribonuclease DdI4.2e-1030.3Show/hide
Query:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSAT--VFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAAD
        I  L+D++   W  L +G NT  W  +++ HGTCS T  + D   YF  G+  Y    I + L    + PS +  +       AI      K G+ C++ 
Subjt:  IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSAT--VFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAAD

Query:  QRGRTQLKMVVLCYSKDGATMIDCPDNVSSSC
             QL  V +C  K+  +++DCPD    SC
Subjt:  QRGRTQLKMVVLCYSKDGATMIDCPDNVSSSC
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATTTCATTGCAAGACCGAATGGGCGAATACTGGCAGGACCTAGTCAGCGGAGACAACACCGCGGCTTGGCAGACCAAATGGGCAATCCACGGGACTTGCTCGGCCAC
GGTGTTTGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACGTATGGCCGCCATGCTATCCTATCATTTCTGGTGCACGGCGGCCTGGTCCCGAGCTCTGCTCAACTGC
ACCACAAGACTAGCTTTATCAAAGCCATCGCGGACGTGACCTCGAAAAAGGGCGGCGTCATCTGTGCGGCCGACCAGCGGGGCCGAACACAGCTGAAGATGGTGGTTTTG
TGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATGTCAGTAGTTCCTGCCCTGATAAGTTCTTGTGGCTT
mRNA sequenceShow/hide mRNA sequence
ATCATTTCATTGCAAGACCGAATGGGCGAATACTGGCAGGACCTAGTCAGCGGAGACAACACCGCGGCTTGGCAGACCAAATGGGCAATCCACGGGACTTGCTCGGCCAC
GGTGTTTGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACGTATGGCCGCCATGCTATCCTATCATTTCTGGTGCACGGCGGCCTGGTCCCGAGCTCTGCTCAACTGC
ACCACAAGACTAGCTTTATCAAAGCCATCGCGGACGTGACCTCGAAAAAGGGCGGCGTCATCTGTGCGGCCGACCAGCGGGGCCGAACACAGCTGAAGATGGTGGTTTTG
TGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATGTCAGTAGTTCCTGCCCTGATAAGTTCTTGTGGCTT
Protein sequenceShow/hide protein sequence
IISLQDRMGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVL
CYSKDGATMIDCPDNVSSSCPDKFLWL