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MC09g0072 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0072
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC09:708113..708444
RNA-Seq ExpressionMC09g0072
SyntenyMC09g0072
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573572.1 hypothetical protein SDJN03_27459, partial [Cucurbita argyrosperma subsp. sororia]4.49e-1336.36Show/hide
Query:  HRTCSAVVFDEFKYF--CMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIK-AIADVTSKKGGVICAADQRAR-TQLQKVVLCYSKDGATMIDCPDNFS
        H TCS  VF++ +YF   + + T   + +L+ L    L+P+ + +H+   I+ AI     KK G+ C  +++ R +QL ++VLC+ K+G T+IDCP  F 
Subjt:  HRTCSAVVFDEFKYF--CMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIK-AIADVTSKKGGVICAADQRAR-TQLQKVVLCYSKDGATMIDCPDNFS

Query:  SSCPDKFFWL
          CP +F WL
Subjt:  SSCPDKFFWL

KGN45018.2 hypothetical protein Csa_016393 [Cucumis sativus]1.10e-4770.27Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA  FD+FKYFC+GLDTYGRHA+ SFL   GL PSS++   K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PD F WLALGD
Subjt:  PDKFFWLALGD

XP_004149779.2 ribonuclease MC [Cucumis sativus]1.13e-4770.27Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA  FD+FKYFC+GLDTYGRHA+ SFL   GL PSS++   K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PD F WLALGD
Subjt:  PDKFFWLALGD

XP_022143591.1 ribonuclease 1-like [Momordica charantia]8.24e-6789.19Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAH-KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA VFDEFKYFCMGLDTYGRHA+LSFLVHGGLVPSSAQ H K  FIKAIADVTSKKGGVICAADQR RTQL+ VVLCYSKDGATMIDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAH-KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PDKF WLALGD
Subjt:  PDKFFWLALGD

XP_038899255.1 ribonuclease MC-like [Benincasa hispida]1.66e-5980.18Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA VFDEFKYFC+GLDTYGRHA+LSFLVHGGLVPSS++   K  F+KAIAD+TSKKGGVICA DQR RTQLQK VLCY+KDG T+IDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PD F WLALGD
Subjt:  PDKFFWLALGD

TrEMBL top hitse value%identityAlignment
A0A0A0K4L1 Uncharacterized protein3.82e-4970.27Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA  FD+FKYFC+GLDTYGRHA+ SFL   GL PSS++   K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ-AHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PD F WLALGD
Subjt:  PDKFFWLALGD

A0A0A0LAN6 Ribonuclease T(2)3.32e-1136.11Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ--AHKNGFIKAIADVTSKKGGVICAADQRA-RTQLQKVVLCYSKDGATMIDCPDNFSS
        H  CS   F  F+YF + L+   +  +L+ L   GL P ++Q  A +N  +  I   T K  G+ C  + +  ++QL ++VLC  KDGAT+IDCP   S+
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQ--AHKNGFIKAIADVTSKKGGVICAADQRA-RTQLQKVVLCYSKDGATMIDCPDNFSS

Query:  SCPDKFFW
        +C   F W
Subjt:  SCPDKFFW

A0A6J1CQQ9 ribonuclease 1-like3.99e-6789.19Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAH-KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCSA VFDEFKYFCMGLDTYGRHA+LSFLVHGGLVPSSAQ H K  FIKAIADVTSKKGGVICAADQR RTQL+ VVLCYSKDGATMIDCPDN SSSC
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAH-KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFWLALGD
        PDKF WLALGD
Subjt:  PDKFFWLALGD

A0A6J1E266 ribonuclease MC-like1.38e-1133.02Show/hide
Query:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIKAIADVTSKKGGVICAADQRART-QLQKVVLCYSKDGATMIDCPDNFSSSC
        H TCS     +  YF  GLDTY ++ + S L    + PS     K+    AI  +T K  G+ C  +  +R  QL +++LC++K    +IDCP N  + C
Subjt:  HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIKAIADVTSKKGGVICAADQRART-QLQKVVLCYSKDGATMIDCPDNFSSSC

Query:  PDKFFW
         +  +W
Subjt:  PDKFFW

A0A6J1EXD5 Ribonuclease T(2)1.24e-1134.55Show/hide
Query:  HRTCSAVVFDEFKYF--CMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIK-AIADVTSKKGGVICAAD-QRARTQLQKVVLCYSKDGATMIDCPDNFS
        H TCS   F++ +YF   + + T   + +L+ L   GL P++    + G I+ AI   T KK G+ C  + Q  + QL +++LC+ K+G T+IDC     
Subjt:  HRTCSAVVFDEFKYF--CMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIK-AIADVTSKKGGVICAAD-QRARTQLQKVVLCYSKDGATMIDCPDNFS

Query:  SSCPDKFFWL
         +CP +F WL
Subjt:  SSCPDKFFWL

SwissProt top hitse value%identityAlignment
Q7M438 Ribonuclease DdI8.0e-0428.43Show/hide
Query:  HRTCSAV--VFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAHKN-GFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSS
        H TCS    + D   YF  G+  Y    + + L    + PS +  +K      AI      K G+ C++      QL  V +C  K+  +++DCPD    
Subjt:  HRTCSAV--VFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAHKN-GFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSS

Query:  SC
        SC
Subjt:  SC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACAGGACTTGCTCGGCCGTGGTGTTCGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACATATGGCCGCCATGCTGTCCTGTCATTTCTGGTGCACGGTGGCCTGGT
CCCGAGCTCCGCTCAGGCACACAAGAATGGCTTTATCAAAGCCATCGCCGACGTGACCTCGAAAAAGGGCGGCGTCATCTGCGCGGCCGACCAGCGGGCCCGAACACAGC
TGCAGAAGGTCGTTTTGTGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATTTCAGTAGTTCTTGCCCTGATAAGTTCTTCTGGCTTGCCTTGGGTGAT
mRNA sequenceShow/hide mRNA sequence
CACAGGACTTGCTCGGCCGTGGTGTTCGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACATATGGCCGCCATGCTGTCCTGTCATTTCTGGTGCACGGTGGCCTGGT
CCCGAGCTCCGCTCAGGCACACAAGAATGGCTTTATCAAAGCCATCGCCGACGTGACCTCGAAAAAGGGCGGCGTCATCTGCGCGGCCGACCAGCGGGCCCGAACACAGC
TGCAGAAGGTCGTTTTGTGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATTTCAGTAGTTCTTGCCCTGATAAGTTCTTCTGGCTTGCCTTGGGTGAT
Protein sequenceShow/hide protein sequence
HRTCSAVVFDEFKYFCMGLDTYGRHAVLSFLVHGGLVPSSAQAHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD